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Snhg9 small nucleolar RNA host gene 9 [ Mus musculus (house mouse) ]

Gene ID: 73474, updated on 26-Sep-2022

Summary

Official Symbol
Snhg9provided by MGI
Official Full Name
small nucleolar RNA host gene 9provided by MGI
Primary source
MGI:MGI:1920724
See related
Ensembl:ENSMUSG00000090101 AllianceGenome:MGI:1920724
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700072N11Rik
Summary
Orthologous to human SNHG9 (small nucleolar RNA host gene 9). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in testis adult (RPKM 3.1), liver E14.5 (RPKM 2.6) and 23 other tissues See more
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Genomic context

See Snhg9 in Genome Data Viewer
Location:
17; 17 A3.3
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (24938505..24938939, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (24719531..24719965, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene transducin (beta)-like 3 Neighboring gene ring finger protein 151 Neighboring gene small nucleolar RNA, H/ACA box 7 Neighboring gene small nucleolar RNA, H/ACA box 64 Neighboring gene ribosomal protein S2 Neighboring gene NADH:ubiquinone oxidoreductase subunit B10

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Other Names

  • small nucleolar RNA host gene (non-protein coding) 9

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027900.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC154566
    Related
    ENSMUST00000161706.3

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    24938505..24938939 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)