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pde9a.S phosphodiesterase 9A S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734701, updated on 29-Apr-2017

Summary

Symbol
pde9a.S
Full Name
phosphodiesterase 9A S homeolog
Primary source
Xenbase:XB-GENE-5917018
Locus tag
XELAEV_18014501mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
pde9a; pde9a.L

Genomic context

See pde9a.S in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (29250705..29260563, complement)

Chromosome 2S - NC_030727.1Genomic Context describing neighboring genes Neighboring gene PBX/knotted 1 homeobox 1 S homeolog Neighboring gene fibrous sheath CABYR-binding protein-like Neighboring gene WD repeat domain 4 S homeolog Neighboring gene solute carrier family 37 (glucose-6-phosphate transporter), member 1 S homeolog Neighboring gene ubiquitin-associated and SH3 domain-containing protein A-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_030727.1 Chromosome 2S Reference Xenopus_laevis_v2 Primary Assembly

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General protein information

Preferred Names
phosphodiesterase 9A L homeolog; phosphodiesterase 9A S homeolog
NP_001089641.1
XP_018103946.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096172.2NP_001089641.1  phosphodiesterase 9A S homeolog

    See identical proteins and their annotated locations for NP_001089641.1

    Status: PROVISIONAL

    Source sequence(s)
    BC099362
    UniProtKB/TrEMBL
    Q4KL87
    Conserved Domains (1) summary
    pfam00233
    Location:90310
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v2 Primary Assembly

Genomic

  1. NC_030727.1 Reference Xenopus_laevis_v2 Primary Assembly

    Range
    29250705..29260563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018248457.1XP_018103946.1  phosphodiesterase 9A L homeolog isoform X1

RNA

  1. XR_001934553.1 RNA Sequence

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