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ddx27.L DEAD-box helicase 27 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734505, updated on 5-Sep-2025
Official Symbol
ddx27.L
Official Full Name
DEAD-box helicase 27 L homeolog
Primary source
Xenbase:XB-GENE-923346
Locus tag
XELAEV_18019137mg
See related
EnsemblRapid:ENSXLAG00005002954 AllianceGenome:Xenbase:XB-GENE-923346
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ddx27
Summary
Predicted to enable several functions, including ATP binding activity; RNA helicase activity; and nucleic acid binding activity. Predicted to be located in cytoplasm. Orthologous to human DDX27 (DEAD-box helicase 27). [provided by Alliance of Genome Resources, Apr 2025]
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See ddx27.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
21
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (151381294..151393930, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (134471292..134483967, complement)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene A.superbus venom factor 1 L homeolog Neighboring gene uncharacterized LOC121401649 Neighboring gene C-X-C motif chemokine 16 Neighboring gene arrestin beta 2 L homeolog

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Clone Names

  • MGC114699

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
  
enables helicase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within rRNA processing IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
DEAD-box helicase 27 L homeolog
Names
DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
NP_001089455.1

Length

  • 758

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095986.1 → NP_001089455.1  DEAD-box helicase 27 L homeolog

    See identical proteins and their annotated locations for NP_001089455.1

    Status: PROVISIONAL

    Source sequence(s)
    BC097561
    UniProtKB/TrEMBL
    A0A974DH39, Q4V836
    Related
    ENSXLAP00005008848.1, ENSXLAT00005008974.1
    Conserved Domains (3) summary
    COG0513
    Location:180 → 661
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd00268
    Location:183 → 387
    DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
    pfam00271
    Location:418 → 521
    Helicase_C; Helicase conserved C-terminal domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    151381294..151393930 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials