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gtf2e2.L general transcription factor IIE subunit 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734303, updated on 5-Aug-2018

Summary

Official Symbol
gtf2e2.L
Official Full Name
general transcription factor IIE subunit 2 L homeolog
Primary source
Xenbase:XB-GENE-962390
Locus tag
XELAEV_18005888mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
gtf2e2
Annotation information
Annotation category: partial on reference assembly

Genomic context

See gtf2e2.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (77862994..77892865, complement)

Chromosome 1L - NC_030724.1Genomic Context describing neighboring genes Neighboring gene dynactin subunit 6 L homeolog Neighboring gene RNA binding protein with multiple splicing L homeolog Neighboring gene store-operated calcium entry-associated regulatory factor Neighboring gene glutathione reductase L homeolog

Genomic regions, transcripts, and products

Genomic Sequence:
NC_030724.1 Chromosome 1L Reference Xenopus_laevis_v2 Primary Assembly

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
general transcription factor IIE subunit 2
Names
TFIIE-beta
general transcription factor IIE, polypeptide 2, beta 34kDa
transcription initiation factor IIE subunit beta

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095787.1NP_001089256.1  general transcription factor IIE subunit 2

    See identical proteins and their annotated locations for NP_001089256.1

    Status: PROVISIONAL

    Source sequence(s)
    BC089287
    UniProtKB/Swiss-Prot
    P29540
    UniProtKB/TrEMBL
    A0A1L8HVE9
    Conserved Domains (1) summary
    cd07977
    Location:65143
    TFIIE_beta_winged_helix; TFIIE_beta_winged_helix domain, located at the central core region of TFIIE beta, with double-stranded DNA binding activity

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v2 Primary Assembly

Genomic

  1. NC_030724.1 Reference Xenopus_laevis_v2 Primary Assembly

    Range
    77862994..77892865 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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