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Zfp974 zinc finger protein 974 [ Mus musculus (house mouse) ]

Gene ID: 73430, updated on 17-Nov-2020

Summary

Official Symbol
Zfp974provided by MGI
Official Full Name
zinc finger protein 974provided by MGI
Primary source
MGI:MGI:1920680
See related
Ensembl:ENSMUSG00000070709
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AV321011; BB026409; 1700049G17Rik
Expression
Broad expression in bladder adult (RPKM 1.9), CNS E18 (RPKM 1.6) and 20 other tissues See more
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Genomic context

See Zfp974 in Genome Data Viewer
Location:
7; 7 A3
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (27604839..27629124, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (27905414..27929699, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (28692411..28714449, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 59 Neighboring gene zinc finger protein 607A Neighboring gene protein kinase C, zeta 2 Neighboring gene predicted gene, 26891 Neighboring gene uncharacterized LOC118567479 Neighboring gene predicted pseudogene 10651

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
DNA-binding transcription activator activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001374027.1NP_001360956.1  zinc finger protein 974 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC139063
    Conserved Domains (3) summary
    smart00349
    Location:1475
    KRAB; krueppel associated box
    COG5048
    Location:199574
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:417437
    ZF_C2H2; C2H2 Zn finger [structural motif]
  2. NM_028538.3NP_082814.1  zinc finger protein 974 isoform 2

    See identical proteins and their annotated locations for NP_082814.1

    Status: VALIDATED

    Source sequence(s)
    AC139063
    Consensus CDS
    CCDS21032.1
    UniProtKB/TrEMBL
    Q3UVF6
    Related
    ENSMUSP00000096238.2, ENSMUST00000098639.8
    Conserved Domains (2) summary
    COG5048
    Location:125500
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:343363
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    27604839..27629124 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036153468.1XP_036009361.1  zinc finger protein 974 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:125500
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:343363
    ZF_C2H2; C2H2 Zn finger [structural motif]
  2. XM_030243021.1XP_030098881.1  zinc finger protein 974 isoform X1

    Conserved Domains (3) summary
    smart00349
    Location:1475
    KRAB; krueppel associated box
    COG5048
    Location:199574
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:417437
    ZF_C2H2; C2H2 Zn finger [structural motif]
  3. XM_030243020.2XP_030098880.1  zinc finger protein 974 isoform X1

    Conserved Domains (3) summary
    smart00349
    Location:1475
    KRAB; krueppel associated box
    COG5048
    Location:199574
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:417437
    ZF_C2H2; C2H2 Zn finger [structural motif]
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