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ripk4 receptor interacting serine/threonine kinase 4 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 733737, updated on 5-Mar-2024

Summary

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Official Symbol
ripk4provided by Xenbase
Official Full Name
receptor interacting serine/threonine kinase 4provided by Xenbase
Primary source
Xenbase:XB-GENE-494474
See related
Ensembl:ENSXETG00000000067
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
dik; pkk; rip4; ankk2; ankrd3; ripk4-a; ripk4-b
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (9712857..9730040)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (5717062..5732437)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene C2 calcium-dependent domain containing 2 Neighboring gene uncharacterized LOC116408746 Neighboring gene PR domain 15 Neighboring gene transmembrane serine protease 2 gene 1 Neighboring gene transmembrane serine protease 2 gene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
receptor-interacting serine/threonine-protein kinase 4
Names
Receptor-interacting protein kinase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    9712857..9730040
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002941286.5 → XP_002941332.1  receptor-interacting serine/threonine-protein kinase 4

    UniProtKB/TrEMBL
    A0A803KBY1, F7C1Y6
    Related
    ENSXETP00000111772.1, ENSXETT00000116646.1
    Conserved Domains (3) summary
    PHA03095
    Location:440 → 703
    PHA03095; ankyrin-like protein; Provisional
    cd14025
    Location:25 → 291
    STKc_RIP4_like; Catalytic domain of the Serine/Threonine kinases, Receptor Interacting Protein 4 and similar proteins
    sd00045
    Location:538 → 568
    ANK; ANK repeat [structural motif]

RNA

  1. XR_004221199.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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