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Actrt1 actin-related protein T1 [ Mus musculus (house mouse) ]

Gene ID: 73360, updated on 2-Oct-2018

Summary

Official Symbol
Actrt1provided by MGI
Official Full Name
actin-related protein T1provided by MGI
Primary source
MGI:MGI:1920610
See related
Ensembl:ENSMUSG00000046615 Vega:OTTMUSG00000017582
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Arp-T1; 1700061J02Rik
Orthologs

Genomic context

See Actrt1 in Genome Data Viewer
Location:
X; X A4
Exon count:
1
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) X NC_000086.7 (46329007..46330345)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (43682184..43683522)

Chromosome X - NC_000086.7Genomic Context describing neighboring genes Neighboring gene Fas-activated serine/threonine kinase pseudogene Neighboring gene RIKEN cDNA 4930515L19 gene Neighboring gene ribosomal protein L32 pseudogene Neighboring gene ribosomal protein SA pseudogene

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Clone Names

  • MGC144637, MGC144638

Gene Ontology Provided by MGI

Function Evidence Code Pubs
chromatin binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
negative regulation of transcription, DNA-templated ISO
Inferred from Sequence Orthology
more info
 
regulation of smoothened signaling pathway ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytoskeleton ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
nucleus ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028514.3NP_082790.1  actin-related protein T1

    See identical proteins and their annotated locations for NP_082790.1

    Status: VALIDATED

    Source sequence(s)
    AK006855
    Consensus CDS
    CCDS30102.1
    UniProtKB/Swiss-Prot
    Q9D9J3
    Related
    ENSMUSP00000062570.2, OTTMUSP00000019207, ENSMUST00000059466.2, OTTMUST00000042753
    Conserved Domains (2) summary
    smart00268
    Location:9376
    ACTIN; Actin
    cl17037
    Location:8376
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000086.7 Reference GRCm38.p4 C57BL/6J

    Range
    46329007..46330345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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