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PRKRAP1 protein activator of interferon induced protein kinase EIF2AK2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 731716, updated on 29-Mar-2018

Summary

Official Symbol
PRKRAP1provided by HGNC
Official Full Name
protein activator of interferon induced protein kinase EIF2AK2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:33447
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Annotation information
Annotation category: only annotated on alternate loci in reference assembly

Genomic context

See PRKRAP1 in Genome Data Viewer
Location:
chromosome: 6
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 6 (ALT_REF_LOCI_4) NT_167246.2 (3940270..3941874)
109 current GRCh38.p12 (GCF_000001405.38) 6 (ALT_REF_LOCI_7) NT_167249.2 (3930338..3931951)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 6 (ALT_REF_LOCI_4) NT_167246.1 (3945890..3947494)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 6 (ALT_REF_LOCI_7) NT_167249.1 (3929779..3931383)

NT_167246.2Genomic Context describing neighboring genes Neighboring gene major histocompatibility complex, class II, DR beta 9 (pseudogene) Neighboring gene major histocompatibility complex, class II, DR beta 4 Neighboring gene HLA class II histocompatibility antigen, DR beta 4 chain-like Neighboring gene protein FAM136A-like Neighboring gene family with sequence similarity 8 member A5, pseudogene

NT_167249.2Genomic Context describing neighboring genes Neighboring gene major histocompatibility complex, class II, DR beta 4 Neighboring gene major histocompatibility complex, class II, DR beta 8 (pseudogene) Neighboring gene protein FAM136A-like Neighboring gene major histocompatibility complex, class II, DR beta 7 (pseudogene) Neighboring gene family with sequence similarity 8 member A5, pseudogene

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Other Names

  • protein kinase, interferon-inducible double stranded RNA dependent activator pseudogene 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_023048.2 

    Range
    101..1705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 ALT_REF_LOCI_4

Genomic

  1. NT_167246.2 Reference GRCh38.p12 ALT_REF_LOCI_4

    Range
    3940270..3941874
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p12 ALT_REF_LOCI_7

Genomic

  1. NT_167249.2 Reference GRCh38.p12 ALT_REF_LOCI_7

    Range
    3930338..3931951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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