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MIR3945HG MIR3945 host gene [ Homo sapiens (human) ]

Gene ID: 731424, updated on 25-Jan-2022

Summary

Official Symbol
MIR3945HGprovided by HGNC
Official Full Name
MIR3945 host geneprovided by HGNC
Primary source
HGNC:HGNC:52002
See related
AllianceGenome:HGNC:52002
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in appendix (RPKM 2.1), lung (RPKM 1.7) and 9 other tissues See more
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Genomic context

See MIR3945HG in Genome Data Viewer
Location:
4q35.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (184843296..184855652, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (185764450..185776806, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene primase and DNA directed polymerase Neighboring gene centromere protein U Neighboring gene acyl-CoA synthetase long chain family member 1 Neighboring gene proteoglycan 3, pro eosinophil major basic protein 2 pseudogene Neighboring gene uncharacterized LOC105377587 Neighboring gene microRNA 3945 Neighboring gene PATRR4 recombination region Neighboring gene long intergenic non-protein coding RNA 1093

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Clone Names

  • FLJ32866

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132989.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC084871, BC016366, CB528305

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    184843296..184855652 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_037867.1: Suppressed sequence

    Description
    NR_037867.1: This RefSeq was removed because currently there is insufficient support for the transcript.
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