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CRYZL2P crystallin zeta like 2, pseudogene [ Homo sapiens (human) ]

Gene ID: 730102, updated on 9-Jun-2025
Official Symbol
CRYZL2Pprovided by HGNC
Official Full Name
crystallin zeta like 2, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:52164
See related
Ensembl:ENSG00000293477 AllianceGenome:HGNC:52164
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in duodenum (RPKM 9.7), fat (RPKM 9.1) and 25 other tissues See more
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See CRYZL2P in Genome Data Viewer
Location:
1q25.2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (178006136..178038007, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (177360910..177392778, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (177975271..178007142, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1741 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:177763543-177764294 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:177883789-177884988 Neighboring gene CRYZL2P-SEC16B readthrough Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:177905975-177906476 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:177928928-177929429 Neighboring gene SEC16 homolog B, endoplasmic reticulum export factor Neighboring gene MPRA-validated peak475 silencer Neighboring gene ReSE screen-validated silencer GRCh37_chr1:178019054-178019211 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2141 Neighboring gene uncharacterized LOC124904459 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:178062715-178063216 Neighboring gene RASAL2 antisense RNA 1

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Related articles in PubMed

  1. p53-inducible long non-coding RNA PICART1 mediates cancer cell proliferation and migration. Cao Y, et al. Int J Oncol, 2017 May. PMID 28339031
  2. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. Zhang ZD, et al. Genome Biol, 2010. PMID 20210993, Free PMC Article
  3. Prediction of the coding sequences of unidentified human genes. XXI. The complete sequences of 60 new cDNA clones from brain which code for large proteins. Nagase T, et al. DNA Res, 2001 Aug 31. PMID 11572484
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

GeneRIFs: Gene References Into Functions

Review eQTL and phenotype association data in this region using PheGenI

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Markers

Readthrough CRYZL2P-SEC16B

Readthrough gene: CRYZL2P-SEC16B, Included gene: SEC16B

Other Names

  • quinone oxidoreductase-like protein 2 pseudogene

Clone Names

  • FLJ00305, FLJ35512, FLJ58538, KIAA1928, DKFZp686C2486

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037167.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359075, BX538051
    Related
    ENST00000476232.7

  2. NR_151483.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359075
    Related
    ENST00000760125.1

  3. NR_151484.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359075

  4. NR_151485.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359075
    Related
    ENST00000760121.1

  5. NR_151486.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359075
    Related
    ENST00000512906.3

  6. NR_151487.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359075
    Related
    ENST00000760123.1

  7. NR_151488.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359075
    Related
    ENST00000760122.1

  8. NR_151489.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359075
    Related
    ENST00000760124.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    178006136..178038007 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    177360910..177392778 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials