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LOC730101 uncharacterized LOC730101 [ Homo sapiens (human) ]

Gene ID: 730101, updated on 23-Nov-2021

Summary

Gene symbol
LOC730101
Gene description
uncharacterized LOC730101
See related
Ensembl:ENSG00000216775
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in placenta (RPKM 10.4), duodenum (RPKM 5.9) and 23 other tissues See more
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Genomic context

See LOC730101 in Genome Data Viewer
Location:
6p12.2
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (52664401..52669153)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (52529199..52533951)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene FOXA motif-containing MPRA enhancer 62 Neighboring gene SH3 domain binding glutamate rich protein like 3 pseudogene Neighboring gene Sharpr-MPRA regulatory region 5928 Neighboring gene transmembrane protein 14A Neighboring gene SREK1IP1 pseudogene 2 Neighboring gene glutathione S-transferase alpha 8, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

General gene information

Markers

Clone Names

  • FLJ33798, FLJ38040, FLJ38488, DKFZp566E183

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024403.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AL109918
    Related
    ENST00000602367.2
  2. NR_024405.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal segment compared to variant 1.
    Source sequence(s)
    AL109918
    Related
    ENST00000643631.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    52664401..52669153
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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