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ANKRD34C-AS1 ANKRD34C antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 729911, updated on 25-Jan-2022

Summary

Official Symbol
ANKRD34C-AS1provided by HGNC
Official Full Name
ANKRD34C antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:48618
See related
Ensembl:ENSG00000259234 AllianceGenome:HGNC:48618
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See ANKRD34C-AS1 in Genome Data Viewer
Location:
15q25.1
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (79191707..79283945, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (79484049..79576287, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene Ras protein specific guanine nucleotide releasing factor 1 Neighboring gene uncharacterized LOC105370917 Neighboring gene uncharacterized LOC107984750 Neighboring gene microRNA 184 Neighboring gene heterogeneous nuclear ribonucleoprotein C pseudogene 3 Neighboring gene ankyrin repeat domain 34C Neighboring gene transmembrane p24 trafficking protein 3 Neighboring gene membrane integral NOTCH2 associated receptor 1 Neighboring gene uncharacterized LOC105370918

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Heritability and genetic association analysis of cognition in the Diabetes Heart Study.
EBI GWAS Catalog
Loci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers.
EBI GWAS Catalog

General gene information

Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038997.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    DA316055, DA323807, DA336675, DA364073
    Related
    ENST00000560872.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    79191707..79283945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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