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RPS15P5 ribosomal protein S15 pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 729789, updated on 10-Oct-2023

Summary

Official Symbol
RPS15P5provided by HGNC
Official Full Name
ribosomal protein S15 pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:35536
See related
Ensembl:ENSG00000229806 AllianceGenome:HGNC:35536
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS15_3_372
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Genomic context

Location:
3p14.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (54626185..54626682)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (54660177..54660674)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (54660212..54660709)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124909381 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:54121379-54121902 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:54121903-54122425 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14470 Neighboring gene calcium voltage-gated channel auxiliary subunit alpha2delta 3 Neighboring gene Sharpr-MPRA regulatory region 13251 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:54237261-54237762 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:54246728-54247322 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:54250734-54251234 Neighboring gene NANOG hESC enhancer GRCh37_chr3:54262808-54263341 Neighboring gene uncharacterized LOC124909382 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:54319420-54319921 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:54498481-54498980 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:54497979-54498480 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:54520692-54520885 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:54551370-54551870 Neighboring gene uncharacterized LOC107986088 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:54668358-54668860 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:54668861-54669361 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:54673489-54674415 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:54743647-54744366 Neighboring gene embryonic stem cell related Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:54855004-54855707 Neighboring gene NANOG hESC enhancer GRCh37_chr3:54877384-54877885 Neighboring gene CACNA2D3 antisense RNA 1

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010976.3 

    Range
    101..598
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    54626185..54626682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    54660177..54660674
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    GenBank, FASTA, Sequence Viewer (Graphics)