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FAM230J family with sequence similarity 230 member J [ Homo sapiens (human) ]

Gene ID: 729461, updated on 23-Nov-2021

Summary

Official Symbol
FAM230Jprovided by HGNC
Official Full Name
family with sequence similarity 230 member Jprovided by HGNC
Primary source
HGNC:HGNC:52448
See related
Ensembl:ENSG00000274044
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC01660
Expression
Restricted expression toward testis (RPKM 12.3) See more
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Genomic context

See FAM230J in Genome Data Viewer
Location:
22q11.21
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 22 NC_000022.11 (18361818..18386556, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (20632120..20656858, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene gamma-glutamyltransferase light chain 5 pseudogene Neighboring gene family with sequence similarity 247 member D Neighboring gene protein phosphatase 1 regulatory subunit 26 pseudogene 3 Neighboring gene uncharacterized LOC107987325

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • long intergenic non-protein coding RNA 1660

Clone Names

  • FLJ26056, FLJ61480, AC011718.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_136569.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC011718
    Related
    ENST00000618517.4
  2. NR_165634.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC011718
    Related
    ENST00000619172.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p13 Primary Assembly

    Range
    18361818..18386556 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_201401.2: Suppressed sequence

    Description
    NM_201401.2: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
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