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CETN4P centrin 4, pseudogene [ Homo sapiens (human) ]

Gene ID: 729338, updated on 13-May-2022

Summary

Official Symbol
CETN4Pprovided by HGNC
Official Full Name
centrin 4, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:35450
See related
AllianceGenome:HGNC:35450
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Centrins are members of the calcium-binding EF-hand protein superfamily and accumulate in centrosomes. This gene has been inactivated by mutation and is nonfunctional in humans. [provided by RefSeq, Oct 2008]
Expression
Biased expression in testis (RPKM 7.8), fat (RPKM 2.6) and 5 other tissues See more
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Genomic context

See CETN4P in Genome Data Viewer
Location:
4q27
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (122730189..122732458, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (126034288..126036557, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (123651344..123653613, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene interleukin 21 Neighboring gene IL21 antisense RNA 1 Neighboring gene Bardet-Biedl syndrome 12 Neighboring gene Sharpr-MPRA regulatory region 12847 Neighboring gene DNA damage regulated autophagy modulator 1 pseudogene Neighboring gene CRISPRi-validated cis-regulatory element chr4.2649

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • CETN4 pseudogene
  • centrin EF-hand protein 4, pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024041.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC053545

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    122730189..122732458 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    126034288..126036557 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)