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C12orf71 chromosome 12 open reading frame 71 [ Homo sapiens (human) ]

Gene ID: 728858, updated on 23-Nov-2021

Summary

Official Symbol
C12orf71provided by HGNC
Official Full Name
chromosome 12 open reading frame 71provided by HGNC
Primary source
HGNC:HGNC:34452
See related
Ensembl:ENSG00000214700
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See C12orf71 in Genome Data Viewer
Location:
12p11.23
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (27081057..27084127, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (27233990..27237060, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene FGFR1 oncogene partner 2 Neighboring gene transmembrane 7 superfamily member 3 Neighboring gene mediator complex subunit 21 Neighboring gene nontranscribed chromatin-defined enhancer upstream of C12orf71 Neighboring gene serine/threonine kinase 38 like

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Homology

General protein information

Preferred Names
uncharacterized protein C12orf71

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080406.2NP_001073875.1  uncharacterized protein C12orf71

    See identical proteins and their annotated locations for NP_001073875.1

    Status: VALIDATED

    Source sequence(s)
    AC092747
    Consensus CDS
    CCDS44851.1
    UniProtKB/Swiss-Prot
    A8MTZ7
    Related
    ENSP00000413728.2, ENST00000429849.3
    Conserved Domains (1) summary
    pfam15480
    Location:25261
    DUF4640; Domain of unknown function (DUF4640)
  2. NM_001384983.1NP_001371912.1  uncharacterized protein C12orf71

    Status: VALIDATED

    Source sequence(s)
    AC092747
    Conserved Domains (1) summary
    pfam15480
    Location:25261
    DUF4640; Domain of unknown function (DUF4640)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    27081057..27084127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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