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TULP2 TUB like protein 2 [ Homo sapiens (human) ]

Gene ID: 7288, updated on 23-Nov-2021

Summary

Official Symbol
TULP2provided by HGNC
Official Full Name
TUB like protein 2provided by HGNC
Primary source
HGNC:HGNC:12424
See related
Ensembl:ENSG00000104804 MIM:602309
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CT65; TUBL2
Summary
TULP2 is a member of a family of tubby-like genes (TULPs) that encode proteins of unknown function. Members of this family have been identified in plants, vertebrates, and invertebrates. The TULP proteins share a conserved C-terminal region of approximately 200 amino acid residues. [provided by RefSeq, Jul 2008]
Expression
Restricted expression toward testis (RPKM 9.9) See more
Orthologs
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Genomic context

See TULP2 in Genome Data Viewer
Location:
19q13.33
Exon count:
13
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (48880967..48898744, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (49384224..49402001, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene CRISPRi-FlowFISH-validated FTL and NUCB1 regulatory element Neighboring gene protein phosphatase 1 regulatory subunit 15A Neighboring gene CRISPRi-FlowFISH-validated FTL and NUCB1 regulatory element Neighboring gene CRISPRi-validated cis-regulatory element chr19.5328 Neighboring gene CRISPRi-FlowFISH-validated BAX and NUCB1 regulatory element Neighboring gene nucleobindin 1 Neighboring gene NUCB1 antisense RNA 1 Neighboring gene dihydrodiol dehydrogenase

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein-containing complex binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in protein localization to cilium IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in visual perception TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
is_active_in cilium IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
tubby-related protein 2
Names
cancer testis antigen 65
tubby like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_003323.3NP_003314.2  tubby-related protein 2

    See identical proteins and their annotated locations for NP_003314.2

    Status: VALIDATED

    Source sequence(s)
    AC026803, BC026070, DB442827, U82469
    Consensus CDS
    CCDS12739.1
    UniProtKB/Swiss-Prot
    O00295
    Related
    ENSP00000221399.3, ENST00000221399.8
    Conserved Domains (2) summary
    pfam01167
    Location:279519
    Tub; Tub family
    pfam16322
    Location:27241
    Tub_N; Tubby N-terminal

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    48880967..48898744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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