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LOC728743 zinc finger domain-containing protein LOC728743 [ Homo sapiens (human) ]

Gene ID: 728743, updated on 26-Oct-2022

Summary

Gene symbol
LOC728743
Gene description
zinc finger domain-containing protein LOC728743
See related
Ensembl:ENSG00000284691
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in lymph node (RPKM 5.1), spleen (RPKM 4.4) and 25 other tissues See more
Orthologs
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Genomic context

See LOC728743 in Genome Data Viewer
Location:
7q36.1
Exon count:
8
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (150400702..150412470)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (151579025..151590794)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (150097790..150109558)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene REPIN1 antisense RNA 1 Neighboring gene replication initiator 1 Neighboring gene ZNF775 antisense RNA 1 Neighboring gene zinc finger protein 775 Neighboring gene uncharacterized LOC124901773 Neighboring gene long intergenic non-protein coding RNA 996

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ12702, FLJ12789

General protein information

Preferred Names
zinc finger protein LOC728743

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001395974.1NP_001382903.1  zinc finger protein LOC728743 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC073111
    Consensus CDS
    CCDS94231.1
    UniProtKB/TrEMBL
    B7ZLF3
    Related
    ENSP00000492887.1, ENST00000498682.3
    Conserved Domains (2) summary
    COG5048
    Location:36188
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:7090
    ZF_C2H2; C2H2 Zn finger [structural motif]
  2. NM_001395975.1NP_001382904.1  zinc finger protein LOC728743 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC073111
    Consensus CDS
    CCDS94231.1
    UniProtKB/TrEMBL
    B7ZLF3
    Conserved Domains (2) summary
    COG5048
    Location:36188
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:7090
    ZF_C2H2; C2H2 Zn finger [structural motif]
  3. NM_001395976.1NP_001382905.1  zinc finger protein LOC728743 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC073111
    Consensus CDS
    CCDS94231.1
    UniProtKB/TrEMBL
    B7ZLF3
    Related
    ENSP00000493097.1, ENST00000642087.2
    Conserved Domains (2) summary
    COG5048
    Location:36188
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:7090
    ZF_C2H2; C2H2 Zn finger [structural motif]
  4. NM_001395977.1NP_001382906.1  zinc finger protein LOC728743 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC073111
    Consensus CDS
    CCDS94230.1
    UniProtKB/TrEMBL
    A0A286YF50
    Related
    ENSP00000493012.1, ENST00000641717.1
    Conserved Domains (2) summary
    PHA00733
    Location:3677
    PHA00733; hypothetical protein
    sd00017
    Location:3956
    ZF_C2H2; C2H2 Zn finger [structural motif]

RNA

  1. NR_173085.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC073111
    Related
    ENST00000641330.1
  2. NR_173086.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC073111
  3. NR_173087.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC073111
  4. NR_173088.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC073111

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    150400702..150412470
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047420792.1XP_047276748.1  zinc finger protein LOC728743 isoform X3

    UniProtKB/TrEMBL
    A0A286YF50
  2. XM_047420787.1XP_047276743.1  zinc finger protein LOC728743 isoform X1

    UniProtKB/TrEMBL
    B7ZLF3
  3. XM_047420786.1XP_047276742.1  zinc finger protein LOC728743 isoform X1

    UniProtKB/TrEMBL
    B7ZLF3
  4. XM_047420785.1XP_047276741.1  zinc finger protein LOC728743 isoform X1

    UniProtKB/TrEMBL
    B7ZLF3
  5. XM_047420788.1XP_047276744.1  zinc finger protein LOC728743 isoform X1

    UniProtKB/TrEMBL
    B7ZLF3
  6. XM_047420791.1XP_047276747.1  zinc finger protein LOC728743 isoform X3

    UniProtKB/TrEMBL
    A0A286YF50
  7. XM_047420789.1XP_047276745.1  zinc finger protein LOC728743 isoform X1

    UniProtKB/TrEMBL
    B7ZLF3
  8. XM_047420790.1XP_047276746.1  zinc finger protein LOC728743 isoform X2

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    151579025..151590794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001080852.1: Suppressed sequence

    Description
    NM_001080852.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
  2. NR_027237.1: Suppressed sequence

    Description
    NR_027237.1: This RefSeq was removed because it is now thought that this gene does encode a protein.