U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAP4K3-DT MAP4K3 divergent transcript [ Homo sapiens (human) ]

Gene ID: 728730, updated on 13-May-2022

Summary

Official Symbol
MAP4K3-DTprovided by HGNC
Official Full Name
MAP4K3 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:54056
See related
Ensembl:ENSG00000231312 AllianceGenome:HGNC:54056
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in brain (RPKM 2.0), kidney (RPKM 1.5) and 24 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See MAP4K3-DT in Genome Data Viewer
Location:
2p22.1
Exon count:
6
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (39437416..39601344)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (39446299..39610354)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (39664557..39828484)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 10874 Neighboring gene cyclin dependent kinase like 4 Neighboring gene mitogen-activated protein kinase kinase kinase kinase 3 Neighboring gene RNA, U6 small nuclear 373, pseudogene Neighboring gene Sharpr-MPRA regulatory region 10578 Neighboring gene transmembrane protein 178A Neighboring gene uncharacterized LOC124905994 Neighboring gene THUMP domain containing 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
EBI GWAS Catalog

General gene information

Markers

Clone Names

  • AC007246.3

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037875.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC007388, AC007684
    Related
    ENST00000449569.6

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    39437416..39601344
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    39446299..39610354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)