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ZBED3-AS1 ZBED3 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 728723, updated on 23-Nov-2021

Summary

Official Symbol
ZBED3-AS1provided by HGNC
Official Full Name
ZBED3 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:44188
See related
Ensembl:ENSG00000250802
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
lnc13728
Expression
Broad expression in thyroid (RPKM 2.3), fat (RPKM 2.0) and 17 other tissues See more
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Genomic context

See ZBED3-AS1 in Genome Data Viewer
Location:
5q13.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (77086798..77148351)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (76382623..76444176)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene angiogenic factor with G-patch and FHA domains 1 Neighboring gene small nucleolar RNA, H/ACA box 47 Neighboring gene zinc finger BED-type containing 3 Neighboring gene Sharpr-MPRA regulatory region 15273 Neighboring gene high mobility group box 1 pseudogene 35 Neighboring gene phosphodiesterase 8B Neighboring gene aldehyde dehydrogenase 7 family member A1 pseudogene 1 Neighboring gene WD repeat domain 41 Neighboring gene ribosomal protein S2 pseudogene 24

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis.
EBI GWAS Catalog

General gene information

Markers

Other Names

  • CTC-564N23.3
  • ZBED3 antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024398.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BF111934, CX786597, DA293448
    Related
    ENST00000503969.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    77086798..77148351
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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