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OVOL3 ovo like zinc finger 3 [ Homo sapiens (human) ]

Gene ID: 728361, updated on 23-Nov-2021

Summary

Official Symbol
OVOL3provided by HGNC
Official Full Name
ovo like zinc finger 3provided by HGNC
Primary source
HGNC:HGNC:14186
See related
Ensembl:ENSG00000105261 MIM:616442
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HOVO3
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See OVOL3 in Genome Data Viewer
Location:
19q13.12
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (36111143..36113711)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (36602105..36604613)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927572 Neighboring gene CAP-Gly domain containing linker protein 3 Neighboring gene THAP domain containing 8 Neighboring gene RNY5 pseudogene 10 Neighboring gene WD repeat domain 62 Neighboring gene RNA polymerase II subunit I Neighboring gene uncharacterized LOC105372385 Neighboring gene tubulin folding cofactor B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in epidermal cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in chromatin ISA
Inferred from Sequence Alignment
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
putative transcription factor ovo-like protein 3
Names
OVO homolog-like 3
ovo-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001302757.2NP_001289686.1  putative transcription factor ovo-like protein 3

    See identical proteins and their annotated locations for NP_001289686.1

    Status: VALIDATED

    Source sequence(s)
    AC004144, AD001527
    Consensus CDS
    CCDS82333.1
    UniProtKB/TrEMBL
    A0A0J9YVN9
    Related
    ENSP00000487603.1, ENST00000633214.1
    Conserved Domains (2) summary
    sd00017
    Location:7292
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:112137
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    36111143..36113711
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017027190.1XP_016882679.1  putative transcription factor ovo-like protein 3 isoform X1

    Related
    ENSP00000465620.2, ENST00000585332.3
  2. XM_017027191.1XP_016882680.1  putative transcription factor ovo-like protein 3 isoform X3

  3. XM_011527251.2XP_011525553.1  putative transcription factor ovo-like protein 3 isoform X2

    Conserved Domains (1) summary
    sd00017
    Location:1737
    ZF_C2H2; C2H2 Zn finger [structural motif]

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001270948.1: Suppressed sequence

    Description
    NM_001270948.1: This RefSeq was temporarily suppressed because currently there is not sufficient data to support this transcript.
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