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FAM157A family with sequence similarity 157 member A [ Homo sapiens (human) ]

Gene ID: 728262, updated on 23-Nov-2021

Summary

Official Symbol
FAM157Aprovided by HGNC
Official Full Name
family with sequence similarity 157 member Aprovided by HGNC
Primary source
HGNC:HGNC:34079
See related
Ensembl:ENSG00000236438
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GTF2IP18
Expression
Broad expression in bone marrow (RPKM 14.6), testis (RPKM 7.7) and 23 other tissues See more
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Genomic context

See FAM157A in Genome Data Viewer
Location:
3q29
Exon count:
18
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (198153206..198222513)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (197880077..197949384)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene tubulin beta 8 class VIII pseudogene 8 Neighboring gene uncharacterized LOC107986177 Neighboring gene RNA, U6 small nuclear 860, pseudogene Neighboring gene uncharacterized LOC100133150 Neighboring gene septin 14 pseudogene 3 Neighboring gene capicua transcriptional repressor pseudogene 6

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • family with sequence similarity 157 member A (non-protein coding)
  • general transcription factor IIi pseudogene 18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146164.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC073135
    Related
    ENST00000634862.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    198153206..198222513
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187539.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    13047..82354 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001145248.1: Suppressed sequence

    Description
    NM_001145248.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.
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