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SDHAP2 SDHA pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 727956, updated on 13-May-2022

Summary

Official Symbol
SDHAP2provided by HGNC
Official Full Name
SDHA pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:27408
See related
Ensembl:ENSG00000242086 AllianceGenome:HGNC:27408
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SDHAL2; SDHALP2
Expression
Ubiquitous expression in endometrium (RPKM 12.3), testis (RPKM 12.1) and 25 other tissues See more
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Genomic context

See SDHAP2 in Genome Data Viewer
Location:
3q29
Exon count:
15
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (195658039..195688871)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (198679125..198709418, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (195384910..195415742)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene mucin 20, cell surface associated pseudogene 1 Neighboring gene uncharacterized LOC105374297 Neighboring gene serine/threonine-protein phosphatase 4 regulatory subunit 2-like Neighboring gene MIR570 host gene Neighboring gene uncharacterized LOC124909477 Neighboring gene microRNA 570

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • succinate dehydrogenase complex flavoprotein subunit A pseudogene 2
  • succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2
  • succinate dehydrogenase complex, subunit A, flavoprotein-like 2

Clone Names

  • AC069513.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003265.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK074764, BE712485, BQ445981, DA457940
    Related
    ENST00000429897.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    195658039..195688871
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187532.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    28536..59368
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_187649.1 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    103529..134361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_3

Genomic

  1. NT_187678.1 Reference GRCh38.p14 ALT_REF_LOCI_3

    Range
    107173..138005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_4

Genomic

  1. NT_187688.1 Reference GRCh38.p14 ALT_REF_LOCI_4

    Range
    104091..134923 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_5

Genomic

  1. NT_187689.1 Reference GRCh38.p14 ALT_REF_LOCI_5

    Range
    28536..59368
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_6

Genomic

  1. NT_187690.1 Reference GRCh38.p14 ALT_REF_LOCI_6

    Range
    104803..135635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_7

Genomic

  1. NT_187691.1 Reference GRCh38.p14 ALT_REF_LOCI_7

    Range
    106240..137072 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    198679125..198709418 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)