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SPATA31A3 SPATA31 subfamily A member 3 [ Homo sapiens (human) ]

Gene ID: 727830, updated on 11-Jun-2021

Summary

Official Symbol
SPATA31A3provided by HGNC
Official Full Name
SPATA31 subfamily A member 3provided by HGNC
Primary source
HGNC:HGNC:32003
See related
Ensembl:ENSG00000275969
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM75A3
Expression
Restricted expression toward testis (RPKM 6.0) See more
Orthologs
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Genomic context

See SPATA31A3 in Genome Data Viewer
Location:
9q21.11
Exon count:
5
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (66986304..66992550, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (40700291..40706537)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene zinc finger protein 658 Neighboring gene family with sequence similarity 74 member A3 Neighboring gene uncharacterized LOC105379450 Neighboring gene CNTNAP3 pseudogene 2 Neighboring gene USP12 pseudogene 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • MGC181958, DKFZp434B204

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
spermatogenesis-associated protein 31A3
Names
family with sequence similarity 75, member A3
protein FAM75A3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001083124.1NP_001076593.1  spermatogenesis-associated protein 31A3

    See identical proteins and their annotated locations for NP_001076593.1

    Status: VALIDATED

    Source sequence(s)
    AL353770
    Consensus CDS
    CCDS78400.1
    UniProtKB/Swiss-Prot
    Q5VYP0
    Related
    ENSP00000485118.1, ENST00000428649.4
    Conserved Domains (2) summary
    pfam14650
    Location:396754
    FAM75; FAM75 family
    pfam15371
    Location:76155
    DUF4599; Domain of unknown function (DUF4599)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    66986304..66992550 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011545680.3XP_011543982.1  spermatogenesis-associated protein 31A3 isoform X1

    Conserved Domains (2) summary
    pfam14650
    Location:345703
    FAM75; FAM75 family
    pfam15371
    Location:32104
    DUF4599; Domain of unknown function (DUF4599)
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