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LOC725614 protein cycle [ Apis mellifera (honey bee) ]

Gene ID: 725614, updated on 8-Jan-2019

Summary

Gene symbol
LOC725614
Gene description
protein cycle
See related
BEEBASE:GB43953
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apis
Also known as
Cyc

Genomic context

See LOC725614 in Genome Data Viewer
Location:
chromosome: LG11
Exon count:
17
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG11 NC_037648.1 (1077375..1135441)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG11 NC_007080.3 (887238..946032, complement)

Linkage Group LG11 - NC_037648.1Genomic Context describing neighboring genes Neighboring gene protein SREK1IP1 Neighboring gene nitric oxide synthase-interacting protein homolog Neighboring gene uncharacterized LOC100578524 Neighboring gene uncharacterized LOC102655835 Neighboring gene uncharacterized protein PF11_0213 Neighboring gene breast cancer type 2 susceptibility protein

Genomic regions, transcripts, and products

Pathways from BioSystems

  • Circadian rhythm - fly, organism-specific biosystem (from KEGG)
    Circadian rhythm - fly, organism-specific biosystemCircadian rhythm is an internal biological clock, which enables to sustain an approximately 24-hour rhythm in the absence of environmental cues. In the fruit fly Drosophila melanogaster, seven genes ...

General protein information

Preferred Names
aryl hydrocarbon receptor nuclear translocator-like protein 1; protein cycle
Names
cycle

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037648.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    1077375..1135441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016915106.2XP_016770595.2  protein cycle isoform X4

    Conserved Domains (3) summary
    smart00091
    Location:176234
    PAS; PAS domain
    pfam00010
    Location:99149
    HLH; Helix-loop-helix DNA-binding domain
    cl25986
    Location:375477
    PAS_3; PAS fold
  2. XM_006558024.3XP_006558087.2  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3

    Conserved Domains (3) summary
    smart00091
    Location:426484
    PAS; PAS domain
    pfam00010
    Location:349399
    HLH; Helix-loop-helix DNA-binding domain
    cl25986
    Location:625727
    PAS_3; PAS fold
  3. XM_001121441.5XP_001121441.3  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1

    Conserved Domains (3) summary
    smart00091
    Location:426484
    PAS; PAS domain
    cd00083
    Location:346399
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    cl25986
    Location:625727
    PAS_3; PAS fold
  4. XM_016915105.2XP_016770594.2  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X2

    Conserved Domains (3) summary
    smart00091
    Location:402460
    PAS; PAS domain
    cd00083
    Location:324375
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    cl25986
    Location:601703
    PAS_3; PAS fold
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