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Dnajc25 DnaJ heat shock protein family (Hsp40) member C25 [ Mus musculus (house mouse) ]

Gene ID: 72429, updated on 11-Apr-2024

Summary

Official Symbol
Dnajc25provided by MGI
Official Full Name
DnaJ heat shock protein family (Hsp40) member C25provided by MGI
Primary source
MGI:MGI:1919679
See related
Ensembl:ENSMUSG00000070972 AllianceGenome:MGI:1919679
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2010109C08Rik; 2010203O07Rik
Summary
Predicted to be involved in protein folding. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to several human genes including DNAJC25-GNG10 (DNAJC25-GNG10 readthrough). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in ovary adult (RPKM 8.6), adrenal adult (RPKM 6.2) and 28 other tissues See more
Orthologs
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Genomic context

See Dnajc25 in Genome Data Viewer
Location:
4 B3; 4 32.36 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (58995215..59025573)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (58994799..59025573)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene zinc finger with KRAB and SCAN domains 16 Neighboring gene prostaglandin reductase 1 Neighboring gene STARR-positive B cell enhancer ABC_E9587 Neighboring gene guanine nucleotide binding protein (G protein), gamma 10 Neighboring gene shortage in chiasmata 1 Neighboring gene STARR-positive B cell enhancer ABC_E10236 Neighboring gene STARR-seq mESC enhancer starr_10367 Neighboring gene predicted gene, 35527

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in protein folding IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
dnaJ homolog subfamily C member 25
Names
DnaJ (Hsp40) homolog, subfamily C, member 25

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033165.3NP_001028337.2  dnaJ homolog subfamily C member 25 precursor

    See identical proteins and their annotated locations for NP_001028337.2

    Status: VALIDATED

    Source sequence(s)
    AI480957, AK136359, BI133646, BM951172, BX512063
    Consensus CDS
    CCDS18216.2
    UniProtKB/Swiss-Prot
    A2ALW4, A2ALW5, Q0VBC8, Q3UWH0
    Related
    ENSMUSP00000092680.4, ENSMUST00000095070.4
    Conserved Domains (1) summary
    pfam00226
    Location:48118
    DnaJ; DnaJ domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    58995215..59025573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006538276.5XP_006538339.1  dnaJ homolog subfamily C member 25 isoform X1

    See identical proteins and their annotated locations for XP_006538339.1

    UniProtKB/Swiss-Prot
    A2ALW5
    Related
    ENSMUSP00000118048.3, ENSMUST00000152199.9
  2. XM_006538275.4XP_006538338.1  dnaJ homolog subfamily C member 25 isoform X1

    See identical proteins and their annotated locations for XP_006538338.1

    UniProtKB/Swiss-Prot
    A2ALW5