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Spmap1 sperm microtubule associated protein 1 [ Mus musculus (house mouse) ]

Gene ID: 72215, updated on 5-Mar-2024

Summary

Official Symbol
Spmap1provided by MGI
Official Full Name
sperm microtubule associated protein 1provided by MGI
Primary source
MGI:MGI:1919465
See related
Ensembl:ENSMUSG00000018543 AllianceGenome:MGI:1919465
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700001P01Rik
Summary
Orthologous to human C17orf98 (chromosome 17 open reading frame 98). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 57.6) See more
Orthologs
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Genomic context

See Spmap1 in Genome Data Viewer
Location:
11 D; 11 61.1 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (97662307..97666744, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (97771481..97775918, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene ATP synthase, H+ transporting, mitochondrial FO complex, subunit G2, pseudogene Neighboring gene nuclear encoded tRNA cysteine 18 (anticodon GCA) Neighboring gene ribosomal protein L23 Neighboring gene STARR-positive B cell enhancer ABC_E5272 Neighboring gene small nucleolar RNA, H/ACA box 21 Neighboring gene STARR-seq mESC enhancer starr_30635 Neighboring gene nuclear encoded tRNA cysteine 56 (anticodon GCA)

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
sperm microtubule associated protein 1
Names
uncharacterized protein C17orf98 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028156.2NP_082432.2  sperm microtubule associated protein 1

    See identical proteins and their annotated locations for NP_082432.2

    Status: VALIDATED

    Source sequence(s)
    BC048607, CA466212
    Consensus CDS
    CCDS36297.1
    UniProtKB/Swiss-Prot
    Q80ZQ1, Q9DAQ5
    Related
    ENSMUSP00000103202.2, ENSMUST00000107576.2
    Conserved Domains (1) summary
    pfam15075
    Location:12144
    DUF4542; Domain of unknown function (DUF4542)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    97662307..97666744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)