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1700025C18Rik RIKEN cDNA 1700025C18 gene [ Mus musculus (house mouse) ]

Gene ID: 72211, updated on 25-Sep-2020

Summary

Official Symbol
1700025C18Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700025C18 geneprovided by MGI
Primary source
MGI:MGI:1919461
See related
Ensembl:ENSMUSG00000078935
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 13.2) See more
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Genomic context

See 1700025C18Rik in Genome Data Viewer
Location:
2; 2 H3
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (164920613..164932670, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (165078693..165090750, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (164904193..164916250, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene heat shock protein 90, alpha (cytosolic), class A member 1 pseudogene Neighboring gene nuclear receptor coactivator 5 Neighboring gene CD40 antigen Neighboring gene predicted gene, 36690 Neighboring gene cadherin 22 Neighboring gene predicted gene, 36803

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033448.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK006325
    Related
    ENSMUST00000109304.1

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    164920613..164932670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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