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POLR2E RNA polymerase II, I and III subunit E [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 721178, updated on 17-Aug-2024

Summary

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Official Symbol
POLR2Eprovided by VGNC
Official Full Name
RNA polymerase II, I and III subunit Eprovided by VGNC
Primary source
VGNC:VGNC:76214
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See POLR2E in Genome Data Viewer
Location:
chromosome: 19
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (860504..867437, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (859186..869442, complement)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily A member 7 Neighboring gene Rho GTPase activating protein 45 Neighboring gene glutathione peroxidase 4 Neighboring gene strawberry notch homolog 2 Neighboring gene high mobility group protein B2 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerases I, II, and III subunit RPABC1
Names
RNA polymerase II subunit E
polymerase (RNA) II (DNA directed) polypeptide E, 25kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    860504..867437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015122333.2 → XP_014977819.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X2

    UniProtKB/TrEMBL
    G7NL41, I2CYA3
    Conserved Domains (1) summary
    PLN03111
    Location:1 → 209
    PLN03111; DNA-directed RNA polymerase II subunit family protein; Provisional

  2. XM_015122332.2 → XP_014977818.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X2

    UniProtKB/TrEMBL
    G7NL41, I2CYA3
    Conserved Domains (1) summary
    PLN03111
    Location:1 → 209
    PLN03111; DNA-directed RNA polymerase II subunit family protein; Provisional

  3. XM_028839846.1 → XP_028695679.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1

    UniProtKB/TrEMBL
    G7NL41
    Conserved Domains (1) summary
    PLN03111
    Location:1 → 210
    PLN03111; DNA-directed RNA polymerase II subunit family protein; Provisional

  4. XM_028839845.1 → XP_028695678.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1

    UniProtKB/TrEMBL
    G7NL41
    Conserved Domains (1) summary
    PLN03111
    Location:1 → 210
    PLN03111; DNA-directed RNA polymerase II subunit family protein; Provisional

  5. XM_028839848.1 → XP_028695681.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X3

    Conserved Domains (1) summary
    cl29798
    Location:1 → 138
    RNA_pol_Rpb5_N; RNA polymerase Rpb5, N-terminal domain

  6. XM_028839847.1 → XP_028695680.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X3

    Conserved Domains (1) summary
    cl29798
    Location:1 → 138
    RNA_pol_Rpb5_N; RNA polymerase Rpb5, N-terminal domain
Nucleotide Protein
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