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PHATRDRAFT_859 predicted protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7202808, updated on 21-Dec-2023
Gene symbol
PHATRDRAFT_859
Gene description
predicted protein
Locus tag
PHATRDRAFT_859
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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See PHATRDRAFT_859 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
2
Sequence:
Chromosome: 14; NC_011682.1 (211321..213263)

Chromosome 14 - NC_011682.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein

Genomic Sequence:
NC_011682.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Names
predicted protein

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011682.1 Reference assembly

    Range
    211321..213263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002181829.1 → XP_002181865.1  predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002181865.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7G476
    Conserved Domains (1) summary
    pfam00755
    Location:4 → 621
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
Nucleotide Protein
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