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PHATRDRAFT_47293 hypothetical protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7202328, updated on 18-Jun-2017

Summary

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Gene symbol
PHATRDRAFT_47293
Gene description
hypothetical protein
Locus tag
PHATRDRAFT_47293
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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See PHATRDRAFT_47293 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_011681.1 (210541..212283)

Chromosome 13 - NC_011681.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011681.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011681.1 Reference assembly

    Range
    210541..212283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002181472.1 → XP_002181508.1  predicted protein [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002181508.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7G3W4
    Conserved Domains (3) summary
    PLN02898
    Location:53 → 572
    PLN02898; HMP-P kinase/thiamin-monophosphate pyrophosphorylase
    cd00564
    Location:389 → 577
    TMP_TenI; Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- ...
    pfam08543
    Location:52 → 332
    Phos_pyr_kin; Phosphomethylpyrimidine kinase
Nucleotide Protein
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