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LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 720192, updated on 17-Aug-2024
Official Symbol
LSM4provided by VGNC
Official Full Name
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associatedprovided by VGNC
Primary source
VGNC:VGNC:74304
See related
Ensembl:ENSMMUG00000004405
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
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See LSM4 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (17845319..17871542, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (18324464..18341187, complement)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114674223 Neighboring gene JunD proto-oncogene, AP-1 transcription factor subunit Neighboring gene pyroglutamyl-peptidase I Neighboring gene growth differentiation factor 15

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U6 snRNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in P-body assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in nuclear-transcribed mRNA catabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in spliceosomal snRNP assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of U6 snRNP IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of spliceosomal tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
PubMed 
Preferred Names
U6 snRNA-associated Sm-like protein LSm4
Names
LSM4 homolog, U6 small nuclear RNA associated

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001260573.1NP_001247502.1  U6 snRNA-associated Sm-like protein LSm4

    See identical proteins and their annotated locations for NP_001247502.1

    Status: PROVISIONAL

    Source sequence(s)
    JU470631
    UniProtKB/TrEMBL
    F7GUB8, G7NND9, H9ENV5
    Related
    ENSMMUP00000079861.1, ENSMMUT00000104106.1
    Conserved Domains (1) summary
    cd01723
    Location:277
    LSm4; Like-Sm protein 4

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    17845319..17871542 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028838548.1XP_028694381.1  U6 snRNA-associated Sm-like protein LSm4 isoform X1

    UniProtKB/TrEMBL
    F7GUB8, G7NND9, H9ENV5
    Conserved Domains (1) summary
    cd01723
    Location:277
    LSm4; Like-Sm protein 4