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DHLTA_1 dihydrolipoamide acetyltransferase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7196333, updated on 21-Dec-2023

Summary

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Gene symbol
DHLTA_1
Gene description
dihydrolipoamide acetyltransferase
Locus tag
PHATRDRAFT_17401
Gene type
protein coding
RNA name
dihydrolipoamide acetyltransferase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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See DHLTA_1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_011669.1 (775575..777280, complement)

Chromosome 1 - NC_011669.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene phospholipase C isoform delta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011669.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dihydrolipoyllysine-residue acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process from pyruvate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of pyruvate dehydrogenase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
dihydrolipoamide acetyltransferase
XP_002177160.1
  • Dihydrolipoamide acetyl transferase Pyruvate metabolism & Glycolysis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011669.1 Reference assembly

    Range
    775575..777280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002177124.1 → XP_002177160.1  dihydrolipoamide acetyltransferase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002177160.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7FP61
    Conserved Domains (4) summary
    cd06849
    Location:57 → 126
    lipoyl_domain; Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid ...
    TIGR01349
    Location:54 → 492
    PDHac_trf_mito; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
    pfam00198
    Location:279 → 492
    2-oxoacid_dh; 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
    pfam02817
    Location:193 → 226
    E3_binding; e3 binding domain
Nucleotide Protein
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