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PHATRDRAFT_48799 hypothetical protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7195107, updated on 21-Dec-2023
Gene symbol
PHATRDRAFT_48799
Gene description
hypothetical protein
Locus tag
PHATRDRAFT_48799
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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See PHATRDRAFT_48799 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
2
Sequence:
Chromosome: 19; NC_011687.1 (266415..269613)

Chromosome 19 - NC_011687.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene fucoxanthin chlorophyll a/c protein, deviant Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic Sequence:
NC_011687.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Names
hypothetical protein

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011687.1 Reference assembly

    Range
    266415..269613
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002183296.1 → XP_002183332.1  predicted protein [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002183332.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7G8E6
    Conserved Domains (2) summary
    cd07232
    Location:335 → 762
    Pat_PLPL; Patain-like phospholipase
    COG1752
    Location:418 → 704
    RssA; Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]
Nucleotide Protein
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