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Tmem94 transmembrane protein 94 [ Mus musculus (house mouse) ]

Gene ID: 71947, updated on 26-Sep-2022

Summary

Official Symbol
Tmem94provided by MGI
Official Full Name
transmembrane protein 94provided by MGI
Primary source
MGI:MGI:1919197
See related
Ensembl:ENSMUSG00000020747 AllianceGenome:MGI:1919197
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Kiaa0195; mKIAA0195; 2310067B10Rik
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in central nervous system; dorsal root ganglion; liver; and retina. Orthologous to human TMEM94 (transmembrane protein 94). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in adrenal adult (RPKM 67.7), colon adult (RPKM 64.6) and 28 other tissues See more
Orthologs
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Genomic context

See Tmem94 in Genome Data Viewer
Location:
11; 11 E2
Exon count:
37
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (115656245..115689859)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (115765419..115799033)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23699 Neighboring gene 40S ribosomal protein S28 pseudogene Neighboring gene predicted gene, 46302 Neighboring gene microRNA 5621 Neighboring gene CASK-interacting protein 2 Neighboring gene tRNA splicing endonuclease subunit 54 Neighboring gene LLGL2 scribble cell polarity complex component

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 
  • Endonuclease-mediated (3)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028014.3NP_082290.2  transmembrane protein 94

    See identical proteins and their annotated locations for NP_082290.2

    Status: VALIDATED

    Source sequence(s)
    BC053088, BY028850, CA325552
    Consensus CDS
    CCDS25646.1
    UniProtKB/Swiss-Prot
    Q7TSH8, Q91VY1
    Related
    ENSMUSP00000091440.5, ENSMUST00000093912.11
    Conserved Domains (1) summary
    pfam00689
    Location:12241333
    Cation_ATPase_C; Cation transporting ATPase, C-terminus

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    115656245..115689859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036156999.1XP_036012892.1  transmembrane protein 94 isoform X4

  2. XM_030246339.1XP_030102199.1  transmembrane protein 94 isoform X7

  3. XM_006534271.2XP_006534334.1  transmembrane protein 94 isoform X3

    See identical proteins and their annotated locations for XP_006534334.1

    UniProtKB/Swiss-Prot
    Q7TSH8, Q91VY1
    Conserved Domains (1) summary
    pfam00689
    Location:12241333
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
  4. XM_036157000.1XP_036012893.1  transmembrane protein 94 isoform X7

  5. XM_036157001.1XP_036012894.1  transmembrane protein 94 isoform X7

  6. XM_036156998.1XP_036012891.1  transmembrane protein 94 isoform X3

    UniProtKB/Swiss-Prot
    Q91VY1
  7. XM_030246336.2XP_030102196.1  transmembrane protein 94 isoform X3

    UniProtKB/Swiss-Prot
    Q91VY1
  8. XM_036156997.1XP_036012890.1  transmembrane protein 94 isoform X3

    UniProtKB/Swiss-Prot
    Q91VY1
    Related
    ENSMUSP00000099322.2, ENSMUST00000103033.8
  9. XM_036157002.1XP_036012895.1  transmembrane protein 94 isoform X7

  10. XM_030246337.1XP_030102197.1  transmembrane protein 94 isoform X3

    UniProtKB/Swiss-Prot
    Q91VY1
  11. XM_017314774.2XP_017170263.1  transmembrane protein 94 isoform X5

  12. XM_030246338.1XP_030102198.1  transmembrane protein 94 isoform X6

  13. XM_006534270.4XP_006534333.1  transmembrane protein 94 isoform X1

    UniProtKB/TrEMBL
    A0A668KL57
    Related
    ENSMUSP00000159201.2, ENSMUST00000239299.2
    Conserved Domains (1) summary
    pfam00689
    Location:12351344
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
  14. XM_017314773.2XP_017170262.1  transmembrane protein 94 isoform X2

  15. XM_036157003.1XP_036012896.1  transmembrane protein 94 isoform X8

RNA

  1. XR_004937038.1 RNA Sequence

  2. XR_001780054.3 RNA Sequence