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BCAN brevican [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 718545, updated on 17-Aug-2024
Official Symbol
BCANprovided by VGNC
Official Full Name
brevicanprovided by VGNC
Primary source
VGNC:VGNC:70112
See related
Ensembl:ENSMMUG00000017093
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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See BCAN in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (94306554..94324515, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (131269105..131287068)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106992639 Neighboring gene nestin Neighboring gene uncharacterized LOC106992915 Neighboring gene hyaluronan and proteoglycan link protein 2 Neighboring gene G-patch domain containing 4

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
brevican core protein

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    94306554..94324515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015112247.2 → XP_014967733.2  brevican core protein isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZET1, F7HJ53
    Related
    ENSMMUP00000064120.1, ENSMMUT00000106529.1
    Conserved Domains (7) summary
    cd00033
    Location:814 → 871
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA03247
    Location:353 → 653
    PHA03247; large tegument protein UL36; Provisional
    cd03517
    Location:157 → 251
    Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
    cd03520
    Location:258 → 353
    Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
    pfam00008
    Location:649 → 678
    EGF; EGF-like domain
    cl02432
    Location:687 → 810
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cl11960
    Location:49 → 158
    Ig; Immunoglobulin domain

  2. XM_001116679.4 → XP_001116679.2  brevican core protein isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZET1, H9FYA2
    Conserved Domains (7) summary
    cd00033
    Location:814 → 871
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA03247
    Location:353 → 653
    PHA03247; large tegument protein UL36; Provisional
    cd03517
    Location:157 → 251
    Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
    cd03520
    Location:258 → 353
    Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
    pfam00008
    Location:649 → 678
    EGF; EGF-like domain
    cl02432
    Location:687 → 810
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cl11960
    Location:49 → 158
    Ig; Immunoglobulin domain

  3. XM_015112239.2 → XP_014967725.2  brevican core protein isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZET1, F7HJ53
    Related
    ENSMMUP00000022489.4, ENSMMUT00000024031.4
    Conserved Domains (7) summary
    cd00033
    Location:814 → 871
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA03247
    Location:353 → 653
    PHA03247; large tegument protein UL36; Provisional
    cd03517
    Location:157 → 251
    Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
    cd03520
    Location:258 → 353
    Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
    pfam00008
    Location:649 → 678
    EGF; EGF-like domain
    cl02432
    Location:687 → 810
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cl11960
    Location:49 → 158
    Ig; Immunoglobulin domain

  4. XM_028827598.1 → XP_028683431.1  brevican core protein isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZET1, F7HJ53
    Conserved Domains (7) summary
    cd00033
    Location:814 → 871
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA03247
    Location:353 → 653
    PHA03247; large tegument protein UL36; Provisional
    cd03517
    Location:157 → 251
    Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
    cd03520
    Location:258 → 353
    Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
    pfam00008
    Location:649 → 678
    EGF; EGF-like domain
    cl02432
    Location:687 → 810
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cl11960
    Location:49 → 158
    Ig; Immunoglobulin domain

  5. XM_028827609.1 → XP_028683442.1  brevican core protein isoform X3

    UniProtKB/TrEMBL
    H9FYA4, I2CYT0
    Conserved Domains (4) summary
    PHA03247
    Location:353 → 631
    PHA03247; large tegument protein UL36; Provisional
    cd03517
    Location:157 → 251
    Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
    cd03520
    Location:258 → 353
    Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
    cl11960
    Location:49 → 158
    Ig; Immunoglobulin domain

RNA

  1. XR_003719831.1 RNA Sequence

  2. XR_003719830.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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