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1700001F09Rik RIKEN cDNA 1700001F09 gene [ Mus musculus (house mouse) ]

Gene ID: 71826, updated on 31-Jan-2019

Summary

Official Symbol
1700001F09Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700001F09 geneprovided by MGI
Primary source
MGI:MGI:1919076
See related
Ensembl:ENSMUSG00000095384
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm10377
Expression
Restricted expression toward testis adult (RPKM 11.2) See more

Genomic context

See 1700001F09Rik in Genome Data Viewer
Location:
14; 14 B
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (43342384..43347811, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (44020917..44026344, complement)

Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene predicted gene 8126 Neighboring gene predicted gene 9732 Neighboring gene predicted gene 8127 Neighboring gene predicted gene 9597 Neighboring gene disks large homolog 5-like Neighboring gene predicted gene, 21154 Neighboring gene predicted gene, 41136 Neighboring gene predicted gene, 21162

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Clone Names

  • MGC107255

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC71826

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027940.2NP_082216.1  uncharacterized protein LOC71826

    See identical proteins and their annotated locations for NP_082216.1

    Status: PREDICTED

    Source sequence(s)
    AK005587
    Consensus CDS
    CCDS49459.1
    UniProtKB/TrEMBL
    Q9DAR5
    Related
    ENSMUSP00000136772.1, ENSMUST00000178178.1
    Conserved Domains (1) summary
    pfam04822
    Location:1287
    Takusan; Takusan

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

    Range
    43342384..43347811 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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