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NCBP1 nuclear cap binding protein subunit 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 718256, updated on 5-Mar-2024

Summary

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Official Symbol
NCBP1provided by VGNC
Official Full Name
nuclear cap binding protein subunit 1provided by VGNC
Primary source
VGNC:VGNC:75138
See related
Ensembl:ENSMMUG00000012281
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
23
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (45248068..45287133, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (41980456..42019525, complement)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672759 Neighboring gene XPA, DNA damage recognition and repair factor Neighboring gene uncharacterized LOC106993680 Neighboring gene thiosulfate sulfurtransferase like domain containing 2 Neighboring gene tropomodulin 1 Neighboring gene uncharacterized LOC114672760

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA cap binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear cap binding complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear cap-binding protein subunit 1
Names
nuclear cap binding protein subunit 1, 80kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    45248068..45287133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028835041.1 → XP_028690874.1  nuclear cap-binding protein subunit 1 isoform X5

    Conserved Domains (2) summary
    pfam09088
    Location:111 → 230
    MIF4G_like; MIF4G like
    pfam09090
    Location:245 → 519
    MIF4G_like_2; MIF4G like

  2. XM_028835038.1 → XP_028690871.1  nuclear cap-binding protein subunit 1 isoform X3

    Conserved Domains (2) summary
    pfam09088
    Location:161 → 280
    MIF4G_like; MIF4G like
    pfam09090
    Location:295 → 569
    MIF4G_like_2; MIF4G like

  3. XM_028835039.1 → XP_028690872.1  nuclear cap-binding protein subunit 1 isoform X3

    Conserved Domains (2) summary
    pfam09088
    Location:161 → 280
    MIF4G_like; MIF4G like
    pfam09090
    Location:295 → 569
    MIF4G_like_2; MIF4G like

  4. XM_015117233.2 → XP_014972719.1  nuclear cap-binding protein subunit 1 isoform X2

    UniProtKB/TrEMBL
    G7NEZ5
    Conserved Domains (3) summary
    smart00543
    Location:9 → 173
    MIF4G; Middle domain of eukaryotic initiation factor 4G (eIF4G)
    pfam09088
    Location:284 → 403
    MIF4G_like; MIF4G like
    pfam09090
    Location:418 → 693
    MIF4G_like_2; MIF4G like

  5. XM_015117232.2 → XP_014972718.1  nuclear cap-binding protein subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5R216, G7NEZ5, H9FUT0
    Related
    ENSMMUP00000054350.2, ENSMMUT00000063629.2
    Conserved Domains (3) summary
    smart00543
    Location:28 → 240
    MIF4G; Middle domain of eukaryotic initiation factor 4G (eIF4G)
    pfam09088
    Location:351 → 470
    MIF4G_like; MIF4G like
    pfam09090
    Location:485 → 760
    MIF4G_like_2; MIF4G like

  6. XM_028835040.1 → XP_028690873.1  nuclear cap-binding protein subunit 1 isoform X4

    Conserved Domains (2) summary
    pfam09088
    Location:151 → 270
    MIF4G_like; MIF4G like
    pfam09090
    Location:285 → 560
    MIF4G_like_2; MIF4G like
Nucleotide Protein
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