U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GPATCH1 G-patch domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716715, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
GPATCH1provided by VGNC
Official Full Name
G-patch domain containing 1provided by VGNC
Primary source
VGNC:VGNC:72996
See related
Ensembl:ENSMMUG00000011790
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GPATCH1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
20
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (32543845..32592539)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (29032229..29080274)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene FA core complex associated protein 24 Neighboring gene rhophilin Rho GTPase binding protein 2 Neighboring gene small nucleolar RNA U3 Neighboring gene WD repeat domain 88 Neighboring gene transfer RNA threonine (anticodon AGU)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
G patch domain-containing protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    32543845..32592539
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015123505.2 → XP_014978991.2  G patch domain-containing protein 1

    UniProtKB/TrEMBL
    A0A1D5QTT3, H9ZAM6
    Related
    ENSMMUP00000051463.2, ENSMMUT00000076570.2
    Conserved Domains (3) summary
    cl01255
    Location:403 → 486
    DAGK_cat; Diacylglycerol kinase catalytic domain
    pfam01585
    Location:154 → 181
    G-patch; G-patch domain
    pfam07713
    Location:31 → 116
    DUF1604; Protein of unknown function (DUF1604)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.