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ZC3H12A zinc finger CCCH-type containing 12A [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 713604, updated on 17-Aug-2024

Summary

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Official Symbol
ZC3H12Aprovided by VGNC
Official Full Name
zinc finger CCCH-type containing 12Aprovided by VGNC
Primary source
VGNC:VGNC:79595
Locus tag
EGK_00571
See related
Ensembl:ENSMMUG00000010323
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ZC3H12A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (187106088..187115898, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (36666162..36675971)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene ferritin heavy chain pseudogene Neighboring gene Smad nuclear interacting protein 1 Neighboring gene uncharacterized LOC106997818 Neighboring gene MYST/Esa1 associated factor 6 Neighboring gene uncharacterized LOC114673038 Neighboring gene uncharacterized LOC114673037 Neighboring gene uncharacterized LOC114673039

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3'-UTR-mediated mRNA destabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear-transcribed mRNA catabolic process, RNase MRP-dependent IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonuclease ZC3H12A; endoribonuclease ZC3H12A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    187106088..187115898 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015135655.2 → XP_014991141.1  endoribonuclease ZC3H12A isoform X1

    UniProtKB/TrEMBL
    A0A8J8YIA5, F6RGY4, G7MFW9
    Related
    ENSMMUP00000013530.2, ENSMMUT00000014442.4
    Conserved Domains (1) summary
    pfam11977
    Location:136 → 292
    RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain

  2. XM_001111465.3 → XP_001111465.1  endoribonuclease ZC3H12A isoform X1

    See identical proteins and their annotated locations for XP_001111465.1

    UniProtKB/TrEMBL
    A0A8J8YIA5, F6RGY4, G7MFW9
    Conserved Domains (1) summary
    pfam11977
    Location:136 → 292
    RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain

  3. XM_028835885.1 → XP_028691718.1  endoribonuclease ZC3H12A isoform X2

    Conserved Domains (1) summary
    cl20439
    Location:1 → 16
    RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain
Nucleotide Protein
Heading Accession and Version

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