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LOC711939 contactin associated protein like 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711939, updated on 19-Aug-2024

Summary

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Gene symbol
LOC711939
Gene description
contactin associated protein like 3
See related
Ensembl:ENSMMUG00000016712
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
CNTNAP3
Orthologs
human mouse all
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Genomic context

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See LOC711939 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
24
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (110201957..110437118)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (111257478..111339097, complement)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672682 Neighboring gene uncharacterized LOC114672683 Neighboring gene splicing factor 45-like Neighboring gene vomeronasal 2 receptor 206 pseudogene Neighboring gene arrestin domain-containing protein 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
contactin-associated protein-like 3
Names
cell recognition molecule CASPR3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    110201957..110437118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028835370.1 → XP_028691203.1  contactin-associated protein-like 3 isoform X2

    UniProtKB/TrEMBL
    A0A5F8AJF9, H9H3V7
    Related
    ENSMMUP00000021970.4, ENSMMUT00000023482.4
    Conserved Domains (5) summary
    cd00057
    Location:54 → 176
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cd00110
    Location:794 → 938
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl00085
    Location:590 → 635
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
    pfam02210
    Location:1046 → 1174
    Laminin_G_2; Laminin G domain
    pfam00008
    Location:551 → 582
    EGF; EGF-like domain

  2. XM_028835369.1 → XP_028691202.1  contactin-associated protein-like 3 isoform X1

    UniProtKB/TrEMBL
    A0A5F8AJF9
    Conserved Domains (5) summary
    cd00057
    Location:54 → 176
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cd00110
    Location:793 → 937
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl00085
    Location:590 → 634
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
    pfam02210
    Location:1045 → 1173
    Laminin_G_2; Laminin G domain
    pfam00008
    Location:551 → 582
    EGF; EGF-like domain

  3. XM_028835371.1 → XP_028691204.1  contactin-associated protein-like 3 isoform X3

    UniProtKB/TrEMBL
    A0A5F8AJF9, F6ZUX3
    Related
    ENSMMUP00000005226.4, ENSMMUT00000005551.4
    Conserved Domains (4) summary
    cd00057
    Location:54 → 176
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cd00110
    Location:726 → 870
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam02210
    Location:978 → 1106
    Laminin_G_2; Laminin G domain
    pfam00008
    Location:551 → 582
    EGF; EGF-like domain

  4. XM_028835372.1 → XP_028691205.1  contactin-associated protein-like 3 isoform X4

    Conserved Domains (4) summary
    cd00057
    Location:54 → 176
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cd00110
    Location:794 → 938
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl00085
    Location:590 → 635
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
    pfam00008
    Location:551 → 582
    EGF; EGF-like domain
Nucleotide Protein
Heading Accession and Version

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