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PDX1 pancreatic and duodenal homeobox 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 710936, updated on 17-Aug-2024

Summary

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Official Symbol
PDX1provided by VGNC
Official Full Name
pancreatic and duodenal homeobox 1provided by VGNC
Primary source
VGNC:VGNC:106283
See related
Ensembl:ENSMMUG00000064615
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
IPF1
Orthologs
human mouse all
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Genomic context

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See PDX1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (7144813..7150716)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (7426609..7431791)

Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene GS homeobox 1 Neighboring gene U6 spliceosomal RNA Neighboring gene collagen alpha-2(I) chain-like Neighboring gene uncharacterized LOC106994193 Neighboring gene caudal type homeobox 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in type B pancreatic cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pancreas/duodenum homeobox protein 1
Names
pancreas/duodenum homeobox protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041770.1 Reference Mmul_10 Primary Assembly

    Range
    7144813..7150716
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001096758.4 → XP_001096758.2  pancreas/duodenum homeobox protein 1

    UniProtKB/TrEMBL
    A0A5F8AJY9
    Related
    ENSMMUP00000078156.1, ENSMMUT00000093700.1
    Conserved Domains (1) summary
    pfam00046
    Location:149 → 203
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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