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4933412E24Rik RIKEN cDNA 4933412E24 gene [ Mus musculus (house mouse) ]

Gene ID: 71088, updated on 27-Nov-2024

Summary

Official Symbol
4933412E24Rikprovided by MGI
Official Full Name
RIKEN cDNA 4933412E24 geneprovided by MGI
Primary source
MGI:MGI:1918338
See related
Ensembl:ENSMUSG00000071749 AllianceGenome:MGI:1918338
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Orthologous to human CXorf49 (chromosome X open reading frame 49) and CXorf49B (chromosome X open reading frame 49B). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See 4933412E24Rik in Genome Data Viewer
Location:
15 D1; 15 25.58 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (59886715..59888467, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (60014866..60016618, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene phosphoglycerate mutase 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_38801 Neighboring gene STARR-seq mESC enhancer starr_38802 Neighboring gene STARR-seq mESC enhancer starr_38803 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene predicted gene, 25875 Neighboring gene predicted gene 2682 Neighboring gene predicted gene, 41331 Neighboring gene STARR-seq mESC enhancer starr_38804

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein CXorf49 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027668.1NP_081944.1  uncharacterized protein CXorf49 homolog

    See identical proteins and their annotated locations for NP_081944.1

    Status: VALIDATED

    Source sequence(s)
    AC158563, AK016789, BY102618
    Consensus CDS
    CCDS49612.1
    UniProtKB/Swiss-Prot
    Q9D454
    Related
    ENSMUSP00000094154.3, ENSMUST00000096421.4
    Conserved Domains (1) summary
    pfam15483
    Location:79509
    DUF4641; Domain of unknown function (DUF4641)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    59886715..59888467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)