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RAD50 RAD50 double strand break repair protein [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 710718, updated on 19-Feb-2025
Gene symbol
RAD50
Gene description
RAD50 double strand break repair protein
See related
Ensembl:ENSMMUG00000003130
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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See RAD50 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
28
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (129998030..130086397)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (130239775..130330792)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene colitis associated IRF1 antisense regulator of intestinal homeostasis Neighboring gene interferon regulatory factor 1 Neighboring gene interleukin 5 Neighboring gene uncharacterized LOC114678902 Neighboring gene uncharacterized LOC114678713 Neighboring gene interleukin 13

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables G-quadruplex DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded telomeric DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded telomeric DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromosome organization involved in meiotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomere maintenance via recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomere maintenance via telomerase IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Mre11 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in condensed nuclear chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
DNA repair protein RAD50
Names
RAD50 homolog

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    129998030..130086397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015140734.2 → XP_014996220.1  DNA repair protein RAD50 isoform X1

    UniProtKB/TrEMBL
    F7DGI4, H9YVE3
    Related
    ENSMMUP00000004184.3, ENSMMUT00000004435.4
    Conserved Domains (4) summary
    TIGR00606
    Location:2 → 1323
    rad50; rad50
    cd03240
    Location:1206 → 1308
    ABC_Rad50; ATP-binding cassette domain of Rad50
    pfam00901
    Location:720 → 973
    Orbi_VP5; Orbivirus outer capsid protein VP5
    pfam04423
    Location:670 → 720
    Rad50_zn_hook; Rad50 zinc hook motif

  2. XM_015140735.2 → XP_014996221.1  DNA repair protein RAD50 isoform X1

    UniProtKB/TrEMBL
    F7DGI4, H9YVE3
    Conserved Domains (4) summary
    TIGR00606
    Location:2 → 1323
    rad50; rad50
    cd03240
    Location:1206 → 1308
    ABC_Rad50; ATP-binding cassette domain of Rad50
    pfam00901
    Location:720 → 973
    Orbi_VP5; Orbivirus outer capsid protein VP5
    pfam04423
    Location:670 → 720
    Rad50_zn_hook; Rad50 zinc hook motif

  3. XM_015140736.2 → XP_014996222.1  DNA repair protein RAD50 isoform X2

    UniProtKB/TrEMBL
    H9FNF3, H9YVE3
    Related
    ENSMMUP00000053030.2, ENSMMUT00000068023.2
    Conserved Domains (1) summary
    TIGR00606
    Location:2 → 1312
    rad50

  4. XM_015140739.2 → XP_014996225.1  DNA repair protein RAD50 isoform X6

    UniProtKB/TrEMBL
    A0A1D5QN14
    Conserved Domains (1) summary
    TIGR00606
    Location:1 → 1173
    rad50

  5. XM_015140737.2 → XP_014996223.1  DNA repair protein RAD50 isoform X3

    UniProtKB/TrEMBL
    A0A1D5QN14
    Conserved Domains (4) summary
    TIGR00606
    Location:38 → 1289
    rad50; rad50
    cd03240
    Location:1172 → 1274
    ABC_Rad50; ATP-binding cassette domain of Rad50
    pfam04423
    Location:636 → 686
    Rad50_zn_hook; Rad50 zinc hook motif
    cl21455
    Location:37 → 132
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  6. XM_028849711.1 → XP_028705544.1  DNA repair protein RAD50 isoform X4

    UniProtKB/TrEMBL
    A0A1D5QN14
    Conserved Domains (1) summary
    TIGR00606
    Location:1 → 1224
    rad50

  7. XM_015140738.2 → XP_014996224.1  DNA repair protein RAD50 isoform X5

    UniProtKB/TrEMBL
    A0A1D5QN14
    Conserved Domains (4) summary
    TIGR00606
    Location:1 → 1184
    rad50; rad50
    cd03240
    Location:1067 → 1169
    ABC_Rad50; ATP-binding cassette domain of Rad50
    pfam04423
    Location:531 → 581
    Rad50_zn_hook; Rad50 zinc hook motif
    cl21455
    Location:10 → 27
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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