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Speer3 spermatogenesis associated glutamate (E)-rich protein 3 [ Mus musculus (house mouse) ]

Gene ID: 71026, updated on 27-Jan-2018

Summary

Official Symbol
Speer3provided by MGI
Official Full Name
spermatogenesis associated glutamate (E)-rich protein 3provided by MGI
Primary source
MGI:MGI:1918276
See related
Ensembl:ENSMUSG00000067855 Vega:OTTMUSG00000032782
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
SPEER-3; 4933405P08Rik
Expression
Restricted expression toward testis adult (RPKM 1.7) See more

Genomic context

See Speer3 in Genome Data Viewer
Location:
5; 5 A1
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (13791619..13796819)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (13791619..13796819)

Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene anaphase-promoting complex subunit 5 pseudogene Neighboring gene RIKEN cDNA 4930568A13 gene Neighboring gene predicted gene 6647 Neighboring gene predicted gene 6650 Neighboring gene predicted gene 8968

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
spermatogenesis associated glutamate (E)-rich protein 3
Names
sperm-associated glutamate (E)-rich protein 3
spermatogenic-associated glutamate (E)-rich protein 3

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027650.3NP_081926.2  spermatogenesis associated glutamate (E)-rich protein 3

    See identical proteins and their annotated locations for NP_081926.2

    Status: VALIDATED

    Source sequence(s)
    AK016676, CJ042389
    Consensus CDS
    CCDS39014.2
    UniProtKB/TrEMBL
    Q9D4A3, W4VSP1
    Related
    ENSMUSP00000115668.1, OTTMUSP00000043695, ENSMUST00000124677.1, OTTMUST00000081628
    Conserved Domains (1) summary
    pfam04822
    Location:51132
    Takusan; Takusan

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

    Range
    13791619..13796819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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