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Tektl1 tektin like 1 [ Mus musculus (house mouse) ]

Gene ID: 70976, updated on 5-Mar-2024

Summary

Official Symbol
Tektl1provided by MGI
Official Full Name
tektin like 1provided by MGI
Primary source
MGI:MGI:1918226
See related
Ensembl:ENSMUSG00000078442 AllianceGenome:MGI:1918226
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ccdc105; 4931413A09Rik
Summary
Orthologous to human CCDC105 (coiled-coil domain containing 105). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 44.7) See more
Orthologs
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Genomic context

See Tektl1 in Genome Data Viewer
Location:
10 C1; 10 39.72 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (78582758..78623636, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (78746924..78787802, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 47459 Neighboring gene STARR-seq mESC enhancer starr_27229 Neighboring gene STARR-seq mESC enhancer starr_27231 Neighboring gene STARR-seq mESC enhancer starr_27232 Neighboring gene caspase 14 Neighboring gene predicted gene, 30400 Neighboring gene predicted gene, 53211 Neighboring gene solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 Neighboring gene STARR-seq mESC enhancer starr_27235 Neighboring gene olfactory receptor family 7 subfamily C member 70 Neighboring gene olfactory receptor family 7 subfamily A member 39

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in axonemal B tubule inner sheath IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
tektin-like protein 1
Names
coiled-coil domain containing 105
coiled-coil domain-containing protein 105

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027630.1NP_081906.1  tektin-like protein 1

    See identical proteins and their annotated locations for NP_081906.1

    Status: VALIDATED

    Source sequence(s)
    AC159747
    Consensus CDS
    CCDS48614.1
    UniProtKB/Swiss-Prot
    G3X9S0, Q9D4K7
    Related
    ENSMUSP00000101022.3, ENSMUST00000105383.4
    Conserved Domains (1) summary
    pfam03528
    Location:158237
    Rabaptin; Rabaptin

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    78582758..78623636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030245277.1XP_030101137.1  tektin-like protein 1 isoform X1