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APOD apolipoprotein D [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 709223, updated on 17-Aug-2024

Summary

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Official Symbol
APODprovided by VGNC
Official Full Name
apolipoprotein Dprovided by VGNC
Primary source
VGNC:VGNC:69988
Locus tag
EGK_12242
See related
Ensembl:ENSMMUG00000063008
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See APOD in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (2403317..2415004)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (202370411..202382266, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene 3-hydroxybutyrate dehydrogenase 1 Neighboring gene U1 small nuclear ribonucleoprotein C-like Neighboring gene uncharacterized LOC114676120 Neighboring gene uncharacterized LOC106997195 Neighboring gene 60S ribosomal protein L24 pseudogene Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 2 Neighboring gene U6atac minor spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tissue regeneration IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
apolipoprotein D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    2403317..2415004
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001098104.4 → XP_001098104.2  apolipoprotein D isoform X1

    See identical proteins and their annotated locations for XP_001098104.2

    Conserved Domains (1) summary
    cl21528
    Location:84 → 229
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

  2. XM_015132547.2 → XP_014988033.1  apolipoprotein D isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZCW1, A0A8J8YFT1, F7FST1
    Related
    ENSMMUP00000062473.1, ENSMMUT00000093050.1
    Conserved Domains (1) summary
    cl21528
    Location:37 → 182
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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