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ATXN2L ataxin 2 like [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 708359, updated on 17-Aug-2024

Summary

Official Symbol
ATXN2Lprovided by VGNC
Official Full Name
ataxin 2 likeprovided by VGNC
Primary source
VGNC:VGNC:70159
See related
Ensembl:ENSMMUG00000003298
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
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Genomic context

See ATXN2L in Genome Data Viewer
Location:
chromosome: 20
Exon count:
24
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (26899187..26913992, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (27362674..27377428, complement)

Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene SH2B adaptor protein 1 Neighboring gene Tu translation elongation factor, mitochondrial Neighboring gene eukaryotic translation initiation factor 3 subunit C Neighboring gene CLN3 lysosomal/endosomal transmembrane protein, battenin Neighboring gene apolipoprotein B receptor

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in stress granule assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041773.1 Reference Mmul_10 Primary Assembly

    Range
    26899187..26913992 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015125883.2XP_014981369.1  ataxin-2-like protein isoform X10

    UniProtKB/TrEMBL
    H9Z4W4
    Conserved Domains (4) summary
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:125198
    SM-ATX; Ataxin 2 SM domain
    cl25764
    Location:760999
    PAT1; Topoisomerase II-associated protein PAT1
    cl26464
    Location:338950
    Atrophin-1; Atrophin-1 family
  2. XM_015125889.2XP_014981375.1  ataxin-2-like protein isoform X13

    UniProtKB/TrEMBL
    H9FPF7
    Conserved Domains (4) summary
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam09770
    Location:7981039
    PAT1; Topoisomerase II-associated protein PAT1
    pfam06741
    Location:266334
    LsmAD; LsmAD domain
    pfam14438
    Location:122198
    SM-ATX; Ataxin 2 SM domain
  3. XM_015125887.2XP_014981373.1  ataxin-2-like protein isoform X13

    UniProtKB/TrEMBL
    H9FPF7
    Conserved Domains (4) summary
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam09770
    Location:7981039
    PAT1; Topoisomerase II-associated protein PAT1
    pfam06741
    Location:266334
    LsmAD; LsmAD domain
    pfam14438
    Location:122198
    SM-ATX; Ataxin 2 SM domain
  4. XM_028841346.1XP_028697179.1  ataxin-2-like protein isoform X13

    UniProtKB/TrEMBL
    H9FPF7
    Conserved Domains (4) summary
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam09770
    Location:7981039
    PAT1; Topoisomerase II-associated protein PAT1
    pfam06741
    Location:266334
    LsmAD; LsmAD domain
    pfam14438
    Location:122198
    SM-ATX; Ataxin 2 SM domain
  5. XM_028841341.1XP_028697174.1  ataxin-2-like protein isoform X3

    UniProtKB/TrEMBL
    H9FPF7
    Conserved Domains (4) summary
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam09770
    Location:7981036
    PAT1; Topoisomerase II-associated protein PAT1
    pfam06741
    Location:266334
    LsmAD; LsmAD domain
    pfam14438
    Location:122198
    SM-ATX; Ataxin 2 SM domain
  6. XM_015125875.2XP_014981361.1  ataxin-2-like protein isoform X5

    UniProtKB/TrEMBL
    H9Z4W4
    Conserved Domains (4) summary
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:125198
    SM-ATX; Ataxin 2 SM domain
    cl25764
    Location:760999
    PAT1; Topoisomerase II-associated protein PAT1
    cl26464
    Location:338950
    Atrophin-1; Atrophin-1 family
  7. XM_015125881.2XP_014981367.1  ataxin-2-like protein isoform X8

    UniProtKB/TrEMBL
    H9Z4W2
    Conserved Domains (4) summary
    PHA03247
    Location:6761059
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:125198
    SM-ATX; Ataxin 2 SM domain
  8. XM_015125879.2XP_014981365.1  ataxin-2-like protein isoform X8

    UniProtKB/TrEMBL
    H9Z4W2
    Conserved Domains (4) summary
    PHA03247
    Location:6761059
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:125198
    SM-ATX; Ataxin 2 SM domain
  9. XM_028841344.1XP_028697177.1  ataxin-2-like protein isoform X8

    UniProtKB/TrEMBL
    H9Z4W2
    Conserved Domains (4) summary
    PHA03247
    Location:6761059
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:125198
    SM-ATX; Ataxin 2 SM domain
  10. XM_015125868.2XP_014981354.1  ataxin-2-like protein isoform X1

    UniProtKB/TrEMBL
    H9Z4W2
    Conserved Domains (4) summary
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    PRK10263
    Location:669949
    PRK10263; DNA translocase FtsK; Provisional
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:125198
    SM-ATX; Ataxin 2 SM domain
  11. XM_015125866.2XP_014981352.1  ataxin-2-like protein isoform X1

    UniProtKB/TrEMBL
    H9Z4W2
    Conserved Domains (4) summary
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    PRK10263
    Location:669949
    PRK10263; DNA translocase FtsK; Provisional
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:125198
    SM-ATX; Ataxin 2 SM domain
  12. XM_028841340.1XP_028697173.1  ataxin-2-like protein isoform X1

    UniProtKB/TrEMBL
    H9Z4W2
    Conserved Domains (4) summary
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    PRK10263
    Location:669949
    PRK10263; DNA translocase FtsK; Provisional
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:125198
    SM-ATX; Ataxin 2 SM domain
  13. XM_015125886.2XP_014981372.1  ataxin-2-like protein isoform X12

    UniProtKB/TrEMBL
    F7FFJ8, H9Z4W4, I2CYG4
    Related
    ENSMMUP00000004395.4, ENSMMUT00000004661.4
    Conserved Domains (4) summary
    COG5180
    Location:211746
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam03153
    Location:759943
    TFIIA; Transcription factor IIA, alpha/beta subunit
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:124193
    SM-ATX; Ataxin 2 SM domain
  14. XM_015125885.2XP_014981371.1  ataxin-2-like protein isoform X11

    UniProtKB/TrEMBL
    H9FPF7, I2CUK3
    Related
    ENSMMUP00000004396.4, ENSMMUT00000004662.4
    Conserved Domains (2) summary
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:124193
    SM-ATX; Ataxin 2 SM domain
  15. XM_015125878.2XP_014981364.1  ataxin-2-like protein isoform X7

    UniProtKB/TrEMBL
    H9Z4W4
    Conserved Domains (4) summary
    COG5180
    Location:211746
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam03153
    Location:759943
    TFIIA; Transcription factor IIA, alpha/beta subunit
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:124193
    SM-ATX; Ataxin 2 SM domain
  16. XM_015125877.2XP_014981363.1  ataxin-2-like protein isoform X6

    UniProtKB/TrEMBL
    H9FPF7
    Conserved Domains (2) summary
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:124193
    SM-ATX; Ataxin 2 SM domain
  17. XM_015125870.2XP_014981356.1  ataxin-2-like protein isoform X2

    UniProtKB/TrEMBL
    A0A5F8AD48, H9FPF6
    Related
    ENSMMUP00000075796.1, ENSMMUT00000095313.1
    Conserved Domains (3) summary
    COG5180
    Location:211746
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:124193
    SM-ATX; Ataxin 2 SM domain
  18. XM_015125874.2XP_014981360.1  ataxin-2-like protein isoform X4

    UniProtKB/TrEMBL
    H9FPF7
    Conserved Domains (3) summary
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:124193
    SM-ATX; Ataxin 2 SM domain
  19. XM_015125882.2XP_014981368.1  ataxin-2-like protein isoform X9

    UniProtKB/TrEMBL
    H9FPF7
    Conserved Domains (4) summary
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam03153
    Location:765949
    TFIIA; Transcription factor IIA, alpha/beta subunit
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:124193
    SM-ATX; Ataxin 2 SM domain
  20. XM_028841347.1XP_028697180.1  ataxin-2-like protein isoform X14

    UniProtKB/TrEMBL
    G7NQG8
    Conserved Domains (4) summary
    COG5180
    Location:150691
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam09770
    Location:737975
    PAT1; Topoisomerase II-associated protein PAT1
    pfam06741
    Location:205273
    LsmAD; LsmAD domain
    pfam14438
    Location:61137
    SM-ATX; Ataxin 2 SM domain
  21. XM_015125867.2XP_014981353.1  ataxin-2-like protein isoform X1

    UniProtKB/TrEMBL
    H9Z4W2
    Conserved Domains (4) summary
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    PRK10263
    Location:669949
    PRK10263; DNA translocase FtsK; Provisional
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:125198
    SM-ATX; Ataxin 2 SM domain
  22. XM_015125888.2XP_014981374.1  ataxin-2-like protein isoform X13

    UniProtKB/TrEMBL
    H9FPF7
    Related
    ENSMMUP00000079735.1, ENSMMUT00000094170.1
    Conserved Domains (4) summary
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam09770
    Location:7981039
    PAT1; Topoisomerase II-associated protein PAT1
    pfam06741
    Location:266334
    LsmAD; LsmAD domain
    pfam14438
    Location:122198
    SM-ATX; Ataxin 2 SM domain
  23. XM_015125880.2XP_014981366.1  ataxin-2-like protein isoform X8

    UniProtKB/TrEMBL
    H9Z4W2
    Related
    ENSMMUP00000075642.1, ENSMMUT00000088588.1
    Conserved Domains (4) summary
    PHA03247
    Location:6761059
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:211752
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:266328
    LsmAD; LsmAD domain
    pfam14438
    Location:125198
    SM-ATX; Ataxin 2 SM domain

RNA

  1. XR_003725579.1 RNA Sequence

  2. XR_001441691.2 RNA Sequence