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CHD8 chromodomain helicase DNA binding protein 8 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 708169, updated on 17-Aug-2024
Official Symbol
CHD8provided by VGNC
Official Full Name
chromodomain helicase DNA binding protein 8provided by VGNC
Primary source
VGNC:VGNC:71060
See related
Ensembl:ENSMMUG00000015002
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Location:
chromosome: 7
Exon count:
41
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (83288278..83356236, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (82633264..82701430, complement)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene RPGR interacting protein 1 Neighboring gene SPT16 homolog, facilitates chromatin remodeling subunit Neighboring gene small nucleolar RNA U6-53/MBII-28 Neighboring gene small nucleolar RNA U6-53/MBII-28 Neighboring gene ubiquitin-like Neighboring gene eukaryotic translation initiation factor 4E-binding protein 1 pseudogene Neighboring gene RAB2B, member RAS oncogene family Neighboring gene TOX high mobility group box family member 4

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
chromodomain-helicase-DNA-binding protein 8
XP_001096619.3
XP_014998731.2
XP_014998732.2
XP_014998733.2
XP_014998737.2
XP_014998738.2
XP_028707218.1
XP_028707219.1
XP_028707220.1
XP_028707221.1

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    83288278..83356236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015143246.2 → XP_014998732.2  chromodomain-helicase-DNA-binding protein 8 isoform X1

    UniProtKB/TrEMBL
    H9EN66
    Conserved Domains (7) summary
    smart00592
    Location:2318 → 2362
    BRK; domain in transcription and CHROMO domain helicases
    PLN03142
    Location:810 → 1409
    PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
    PHA03247
    Location:68 → 280
    PHA03247; large tegument protein UL36; Provisional
    pfam10500
    Location:490 → 584
    SR-25; Nuclear RNA-splicing-associated protein
    cd18663
    Location:721 → 779
    CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18668
    Location:638 → 703
    CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18060
    Location:811 → 1032
    DEXHc_CHD8; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 8

  2. XM_015143251.2 → XP_014998737.2  chromodomain-helicase-DNA-binding protein 8 isoform X4

    UniProtKB/TrEMBL
    G7MWS9
    Conserved Domains (6) summary
    smart00592
    Location:2039 → 2083
    BRK; domain in transcription and CHROMO domain helicases
    PLN03142
    Location:531 → 1130
    PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
    pfam10500
    Location:211 → 305
    SR-25; Nuclear RNA-splicing-associated protein
    cd18663
    Location:442 → 500
    CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18668
    Location:359 → 424
    CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cl28899
    Location:532 → 753
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  3. XM_001096619.4 → XP_001096619.3  chromodomain-helicase-DNA-binding protein 8 isoform X5

    UniProtKB/TrEMBL
    G7MWS9
    Conserved Domains (6) summary
    smart00592
    Location:2031 → 2075
    BRK; domain in transcription and CHROMO domain helicases
    PLN03142
    Location:531 → 1130
    PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
    pfam10500
    Location:211 → 305
    SR-25; Nuclear RNA-splicing-associated protein
    cd18663
    Location:442 → 500
    CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18668
    Location:359 → 424
    CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cl28899
    Location:532 → 753
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  4. XM_015143245.2 → XP_014998731.2  chromodomain-helicase-DNA-binding protein 8 isoform X1

    UniProtKB/TrEMBL
    H9EN66
    Conserved Domains (7) summary
    smart00592
    Location:2318 → 2362
    BRK; domain in transcription and CHROMO domain helicases
    PLN03142
    Location:810 → 1409
    PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
    PHA03247
    Location:68 → 280
    PHA03247; large tegument protein UL36; Provisional
    pfam10500
    Location:490 → 584
    SR-25; Nuclear RNA-splicing-associated protein
    cd18663
    Location:721 → 779
    CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18668
    Location:638 → 703
    CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18060
    Location:811 → 1032
    DEXHc_CHD8; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 8

  5. XM_015143252.2 → XP_014998738.2  chromodomain-helicase-DNA-binding protein 8 isoform X4

    UniProtKB/TrEMBL
    G7MWS9
    Conserved Domains (6) summary
    smart00592
    Location:2039 → 2083
    BRK; domain in transcription and CHROMO domain helicases
    PLN03142
    Location:531 → 1130
    PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
    pfam10500
    Location:211 → 305
    SR-25; Nuclear RNA-splicing-associated protein
    cd18663
    Location:442 → 500
    CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18668
    Location:359 → 424
    CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cl28899
    Location:532 → 753
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  6. XM_015143247.2 → XP_014998733.2  chromodomain-helicase-DNA-binding protein 8 isoform X1

    UniProtKB/TrEMBL
    H9EN66
    Conserved Domains (7) summary
    smart00592
    Location:2318 → 2362
    BRK; domain in transcription and CHROMO domain helicases
    PLN03142
    Location:810 → 1409
    PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
    PHA03247
    Location:68 → 280
    PHA03247; large tegument protein UL36; Provisional
    pfam10500
    Location:490 → 584
    SR-25; Nuclear RNA-splicing-associated protein
    cd18663
    Location:721 → 779
    CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18668
    Location:638 → 703
    CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18060
    Location:811 → 1032
    DEXHc_CHD8; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 8

  7. XM_028851386.1 → XP_028707219.1  chromodomain-helicase-DNA-binding protein 8 isoform X3

    UniProtKB/TrEMBL
    A0A5F8A229
    Related
    ENSMMUP00000070951.1, ENSMMUT00000088254.1
    Conserved Domains (7) summary
    smart00592
    Location:2327 → 2367
    BRK; domain in transcription and CHROMO domain helicases
    PLN03142
    Location:810 → 1409
    PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
    PHA03247
    Location:68 → 280
    PHA03247; large tegument protein UL36; Provisional
    pfam10500
    Location:490 → 584
    SR-25; Nuclear RNA-splicing-associated protein
    cd18663
    Location:721 → 779
    CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18668
    Location:638 → 703
    CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18060
    Location:811 → 1032
    DEXHc_CHD8; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 8

  8. XM_028851385.1 → XP_028707218.1  chromodomain-helicase-DNA-binding protein 8 isoform X2

    UniProtKB/TrEMBL
    F7GN20, H9EN66, H9ZBQ7
    Related
    ENSMMUP00000033135.3, ENSMMUT00000040064.3
    Conserved Domains (7) summary
    smart00592
    Location:2310 → 2354
    BRK; domain in transcription and CHROMO domain helicases
    PLN03142
    Location:810 → 1409
    PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
    PHA03247
    Location:68 → 280
    PHA03247; large tegument protein UL36; Provisional
    pfam10500
    Location:490 → 584
    SR-25; Nuclear RNA-splicing-associated protein
    cd18663
    Location:721 → 779
    CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18668
    Location:638 → 703
    CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18060
    Location:811 → 1032
    DEXHc_CHD8; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 8

  9. XM_028851387.1 → XP_028707220.1  chromodomain-helicase-DNA-binding protein 8 isoform X4

    UniProtKB/TrEMBL
    G7MWS9
    Conserved Domains (6) summary
    smart00592
    Location:2039 → 2083
    BRK; domain in transcription and CHROMO domain helicases
    PLN03142
    Location:531 → 1130
    PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
    pfam10500
    Location:211 → 305
    SR-25; Nuclear RNA-splicing-associated protein
    cd18663
    Location:442 → 500
    CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18668
    Location:359 → 424
    CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cl28899
    Location:532 → 753
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  10. XM_028851388.1 → XP_028707221.1  chromodomain-helicase-DNA-binding protein 8 isoform X6

    UniProtKB/TrEMBL
    G7MWS9
    Conserved Domains (5) summary
    smart00592
    Location:1747 → 1791
    BRK; domain in transcription and CHROMO domain helicases
    PLN03142
    Location:239 → 838
    PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
    cd18663
    Location:150 → 208
    CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cd18668
    Location:67 → 132
    CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
    cl28899
    Location:240 → 461
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
Nucleotide Protein
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