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SETDB2 SET domain bifurcated 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 706277, updated on 16-Oct-2016
Gene symbol
SETDB2
Gene description
SET domain bifurcated 2
Locus tag
EGK_09322
See related
Ensembl:ENSMMUG00000013473
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
Location:
chromosome: 17
Exon count:
17
Annotation release Status Assembly Chr Location
102 current Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (28693408..28748198)
Build 1.2 previous assembly Mmul_051212 (GCF_000002255.3) 17 NC_007874.1 (28264008..28347029)

Chromosome 17 - NC_027909.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994261 Neighboring gene cytidine and dCMP deaminase domain containing 1 Neighboring gene calcium binding protein 39 like Neighboring gene beta-citrylglutamate synthase B pseudogene Neighboring gene PHD finger protein 11 Neighboring gene RCC1 and BTB domain containing protein 1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Preferred Names
histone-lysine N-methyltransferase SETDB2

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_8.0.1 Primary Assembly

Genomic

  1. NC_027909.1 Reference Mmul_8.0.1 Primary Assembly

    Range
    28693408..28748198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015121057.1XP_014976543.1  

    UniProtKB/TrEMBL
    G7NK50
    Related
    ENSMMUP00000017711, ENSMMUT00000018910
    Conserved Domains (3) summary
    smart00317
    Location:630696
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    cd01395
    Location:164224
    HMT_MBD; Methyl-CpG binding domains (MBD) present in putative histone methyltransferases (HMT) such as CLLD8 and SETDB1 proteins; CLLD8 contains a MBD, a PreSET and a bifurcated SET domain, suggesting that CLLD8 might be associated with methylation-mediated ...
    pfam05033
    Location:246359
    Pre-SET; Pre-SET motif
  2. XM_015121056.1XP_014976542.1  

    UniProtKB/TrEMBL
    G7NK50
    Conserved Domains (3) summary
    smart00317
    Location:630696
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    cd01395
    Location:164224
    HMT_MBD; Methyl-CpG binding domains (MBD) present in putative histone methyltransferases (HMT) such as CLLD8 and SETDB1 proteins; CLLD8 contains a MBD, a PreSET and a bifurcated SET domain, suggesting that CLLD8 might be associated with methylation-mediated ...
    pfam05033
    Location:246359
    Pre-SET; Pre-SET motif
  3. XM_015121058.1XP_014976544.1  

    Conserved Domains (3) summary
    smart00317
    Location:589655
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    pfam05033
    Location:205318
    Pre-SET; Pre-SET motif
    cl00110
    Location:164188
    MBD; MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and BAZ2A-like proteins constitute a family of proteins that share the methyl-CpG-binding domain (MBD). The MBD consists of about 70 residues and is defined as the minimal region required for binding to ...
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